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ObesityNCT02367287

USDA Western Human Nutrition Research Center (WHNRC) Cross-Sectional Nutritional Phenotyping Study

An observational study of Obesity and Inflammation, run by USDA, Western Human Nutrition Research Center at 1 site in United States.

Completed

Finished. The study has ended and is not enrolling. Results may be posted on the official record.

Official record
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Trial summary

Although the diet of the US population meets or exceeds recommended intake levels of most essential nutrients, the quality of the diet consumed by many Americans is sub-optimal due to excessive intake of added sugars, solid fats, refined grains, and sodium. The foundations and outcomes of healthy vs. Read more about this study

Who is it for?
Ages 18 to 65 yearsHealthy volunteers can take part
Conditions the study is for
Obesity, Inflammation
How many people
393 participants
Where
1 siteUnited States
Study dates
May 2015to 24 Jul 2019
Phase
Observational
Are there results?
None posted in the registry

Key requirements

Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.

  • Ages 18 to 65 years
  • All sexes
  • Healthy volunteers accepted
  • Adult, Older adult

Study population: Healthy people in the general population

Who may be able to join

  • 18-65 y
  • Male or female
  • Body Mass Index 18.5-45.0 kg/m2 (Normal to obese)

Who cannot join

  • Pregnant or lactating women
  • Known allergy to egg-white protein
  • Systolic blood pressure greater than 140 mm Hg or diastolic blood pressure greater than 90 mm Hg measured on three separate occasions
  • Diagnosed active chronic diseases for which the individual is currently taking daily medication, including but not limited to:
  • Diabetes mellitus
  • Cardiovascular disease
Show all 19Show fewer
  • Cancer
  • Gastrointestinal disorders
  • Kidney disease
  • Liver disease
  • Bleeding disorders
  • Asthma
  • Autoimmune disorders
  • Hypertension
  • Osteoporosis
  • Recent minor surgery (within 4 wk) or major surgery (within 16 wk)
  • Recent antibiotic therapy (within 4 wk)
  • Recent hospitalization (within 4 wk)
  • Use of prescription medications at the time of the study that directly affect endpoints of interest (e.g. hyperlipidemia, glycemic control, steroids, statins, anti-inflammatory agents, and over-the-counter weight loss aids)

Trial locations and contacts

1 site in 1 country.

United States1 site
  • USDA, Western Human Nutrition Research Center

    Davis, California, 95616

Other trials in United States

About this study

Official title: Assessing the Impact of Diet on Inflammation in Healthy and Obese Adults in a Cross-Sectional Phenotyping Study

Although the diet of the US population meets or exceeds recommended intake levels of most essential nutrients, the quality of the diet consumed by many Americans is sub-optimal due to excessive intake of added sugars, solid fats, refined grains, and sodium. The foundations and outcomes of healthy vs. unhealthy eating habits and activity levels are complex and involve interactions between the environment and innate physiologic/genetic background. For instance, emerging research implicates chronic and acute stress responses and perturbations in the Hypothalamic-Pituitary-Adrenal axis in triggering obesity-promoting metabolic changes and poor food choices. In addition, the development of many chronic diseases, including cardiovascular disease, diabetes, cancer, asthma and autoimmune disease, results from an overactive immune response to host tissue or environmental antigens (e.g. inhaled allergens). A greater understanding is needed of the distribution of key environment-physiology interactions that drive overconsumption, create positive energy balance, and put health at risk.

Researchers from the United States Department of Agriculture (USDA) Western Human Nutrition Research Center are conducting a cross-sectional "metabolic phenotyping" study of healthy people in the general population. Observational measurements include the interactions of habitual diet with the metabolic response to food intake, production of key hormones, the conversion of food into energy: the metabolism of fats, proteins, and carbohydrates, characteristics of the immune system, stress response, gut microbiota (bacteria in the intestinal tract), and cardiovascular health. Most outcomes will be measured in response to a mixed macronutrient/high fat challenge meal.

Read the detailed description

Many inflammatory responses can be modulated by specific dietary components. For example, in cardiovascular disease, macrophages and T-cells react with oxidized LDL (an endogenous modified antigen) to produce arterial plaque and subsequent blockage of coronary arteries. High intake of saturated fats (or simple sugars that drive synthesis of saturated fatty acids) may promote this inflammation by affecting macrophages and T-cells. Conversely, increased intake of omega-3 fatty acids may decrease inflammation by suppression of macrophage and T-cell pro-inflammatory activity. Long-term sub-clinical inflammation caused by intestinal bacteria has been linked to the development of Irritable Bowel Disease and related disorders. Low intake of fruits, vegetables, or whole grains or high intake of saturated fats may promote sub-clinical gut inflammation by promoting dysbiosis of the gut microbiota. Allergic asthma develops in predisposed individuals as a result of an overactive allergic-type immune response to inhaled environmental allergens. Dietary factors such as vitamin D and omega-3 fatty acids may diminish pro-inflammatory responses to environmental allergens by promoting the development of T-regulatory cells and other anti-inflammatory factors.

Individual variability in chronic disease risk is well recognized. For example, why does excess adiposity lead to disease in some individuals and not others? The nature of the fat tissue rather than the abundance, may impact cross-talk with other metabolically-relevant tissues and affect disease risk. It is important to characterize healthy vs. unhealthy phenotypes across various tissues and to understand how micro- and macro-nutrients interact with molecular and metabolic pathways to support a healthy body weight. This study brings together scientists with expertise in nutritional sciences, immunology, analytical chemistry, physiology, neuroendocrinology, and behavior to understand how diet impacts metabolism and disease risk through the interplay and coordination of signals and metabolites arising from multiple organ systems.

The overall objective is to characterize the phenotypic profile of participants according to their immunologic, physiologic, neuroendocrine, and metabolic responses to a dietary challenge and a physical fitness challenge by addressing the specific aims listed below. The cross-sectional study is organized into two study visits (Visit 1 and Visit 2) separated by approximately two weeks of at-home specimen and data collection.

Specific Aim 1: To determine if diet quality is independently associated with systemic immune activation, inflammation, or oxidative stress differentiated by:

  1. pro-inflammatory T-helper cells (Th1, Th2, and Th17 cells) and related cytokines
  2. anti-inflammatory T-regulatory cells and related cytokines
  3. dysbiosis of the gut microbiota and markers of gut inflammation (e.g. neopterin and myeloperoxidase)
  4. and to evaluate the association between dysbiosis of the gut microbiota, gut inflammation, and systemic immune activation
  5. plasma metabolomic response to a mixed macronutrient challenge meal (includes diet quality and physical activity as independent variables)
  6. endothelial (dys)function and vascular reactivity

Specific Aim 2: To determine if a high fat/sugar challenge meal induces differential effects over time (0-6h postprandial) according to habitual diet characteristics, physical activity levels, stress levels, age, sex, or BMI on:

  1. postprandial monocyte activation
  2. plasma lipid metabolomic responses including non-esterified fatty acids, phospholipids, triacylglycerols, red blood cell fatty acids, endocannabinoids, bile acids, eicosanoids and related oxylipins, ceramides, sphingoid bases, and acylcarnitines
  3. plasma amino acid metabolomics
  4. glucose metabolism and metabolic flexibility (i.e. the ability to switch from glucose to lipid oxidation as energy sources)
  5. changes in endocrinology and self-report of hunger and satiety
  6. postprandial free cortisol

Specific Aim 3: To determine the mechanisms of:

  1. postprandial monocyte activation
  2. suppression of challenge-meal induced monocyte activation by docosahexaenoic acid (DHA) (in an ex vivo experiment using a subset of samples)

Specific Aim 4: To evaluate the associations between eating behavior, physical activity, and/or anthropometry and the outcomes:

  1. endocrinology of hunger and satiety
  2. plasma metabolomic responses
  3. vulnerability and resistance to stress
  4. endothelial (dys)function and vascular reactivity
  5. prediction of insulin sensitivity

Specific Aim 5: To determine how genetic variants affect nutrient metabolism, cardiovascular physiology, and immune function and improve understanding of how dietary factors affect these metabolic, cardiovascular and immune phenotypes.

Keywords
Diet, Phenotype, Immunology, Microbiota, Metabolomics, Physical activity, Neuroendocrine system, Nutritional Physiological Phenomena
Medical subject headings
Obesity, Inflammation, Motor Activity

What participants receive

What participants receive. In a randomised study each person is assigned to one group by chance.

Study groups in NCT02367287
Study groupRoleWhat they receive
Sampling strataStratified analyses of primary and secondary outcomes based on variables of interest (e.g. sex, age, or BMI) may occur prior to achieving the target for total study enrollment.

What is being measured

The primary outcome is the main question the study is designed to answer.

  1. Baseline level and change in systemic immune activation following challenge meal

    Number and activation level of pro-inflammatory T-helper (Th) cells (Th1, Th2 and Th17), T-regulatory (Treg) cells, and B cells will be measured in fasting blood. Monocytes and neutrophils will be measured in fasting and postprandial blood.

    Measured: 0, 0.5, 3, and 6 hours postprandial

  2. Baseline level and change in plasma metabolome

    Plasma fatty acid profiles of non-esterified fatty acids, phospholipids, triacylglycerols, red blood cell fatty acids, endocannabinoids, bile acids, eicosanoids and related oxylipins, ceramides, sphingoid bases, acylcarnitines, amino acids and other metabolites measured in response to a challenge meal.

    Measured: 0, 0.5, 3, and 6 hours postprandial

Secondary outcomes (39)
  1. Baseline level and change in glucose metabolism

    Glucose and insulin measured in response to a challenge meal.

    Measured: 0, 0.5, 3, and 6 hours postprandial

  2. Baseline level and change in appetitive hormones

    Cholecystokinin, incretins, Peptide YY 3-36, ghrelin measured in response to a challenge meal.

    Measured: 0, 0.5, 3, and 6 hours postprandial

  3. Baseline level and change in mitogen activated protein (MAP) kinase activity

    Mononuclear cells or B cells will be measured for MAP kinase activities in fasting and postprandial blood.

    Measured: 0, 0.5, 3 and 6 hours postprandial

  4. Baseline level and change in dietary-responsive, circulating microRNA

    Plasma microRNA measured in response to a challenge meal

    Measured: 0, 0.5, 3, and 6 hours postprandial

  5. Baseline level and change in RNA transcriptome

    Transcriptome RNA sequenced in whole blood

    Measured: 0, 3, and 6 hours postprandial

  6. Genome Wide Association Study (GWAS)

    DNA sequence from whole blood will be analyzed

    Measured: 0 hours (fasting)

  7. General health

    Clinical chemistry panel and complete blood count

    Measured: 0 hours (Fasting)

  8. Anthropometrics

    Height (cm), weight (kg), waist and hip circumference (cm)

    Measured: single time point

  9. Vital signs

    Blood pressure (mmHg), pulse rate (beats per minute) and temperature (degrees F).

    Measured: single time point

  10. Body composition

    Body composition (percent body fat) and bone mineral density by Dual energy X-ray Absorptiometry scan.

    Measured: single time point

  11. Resting and change in metabolism

    Resting and postprandial metabolic rates, including respiratory exchange ratios.

    Measured: 0, 0.5, 3, and 6 hours postprandial

  12. Gut microbiota

    Gut microbiota composition and gene content will be assessed in stool using polymerase chain reaction (PCR) and sequencing

    Measured: single time point

  13. Gut microbiota fermentation capacity

    The fermentation capacity of microbiota will be measured from a single stool sample

    Measured: single time point

  14. Gut microbiota pathogen resistance capacity

    The pathogen resistance capability of microbiota will be measured from a single stool sample

    Measured: single time point

  15. Gut inflammation

    Gut inflammation will be assessed by measuring molecules in stool and/or the response of intestinal epithelial cell cultures to fecal waters from a single stool sample.

    Measured: single time point

  16. Stool metabolites

    Volatile and short chain fatty acids and bile acids will be measured in a single stool sample.

    Measured: single time point

  17. Stool RNA markers

    RNA markers will provide a measure of genes expressed by cells of the colon naturally present in a single stool sample

    Measured: single time point

  18. Baseline and change in hunger and appetite

    Perceived hunger and fullness will be measured using a visual analog scale. Responses will be a marked on an unsegmented line from 0 or "not at all" to 5 or "extremely."

    Measured: 0, 1, 2, 3, 4, 5, and 6 hours postprandial

  19. Baseline and change in gut fermentation profile

    Breath hydrogen and methane measured in response to a challenge meal.

    Measured: 0, 1, 2, 3, 4, 5, and 6 hours postprandial

  20. Recent dietary intake

    Random selection of 2 week days and 1 weekend day for 24-hour recall using an automated multi-pass method

    Measured: Three 24-hour dietary recalls collected at home

  21. Dietary intake

    Food frequency questionnaire (FFQ)

    Measured: single time point

  22. Behavior assessment

    Chronic stress questionnaire, food choice questionnaires, and a food preference activity.

    Measured: single time point

  23. Taste thresholds

    Sampling tastes of sweet, salty, and bitter solutions in comparison to water to determine threshold of taste detection.

    Measured: single time point

  24. Skin reflectance

    Spectrophotometric measure of skin pigmentation for assessment of vitamin D status.

    Measured: single time point

  25. Peripheral arterial tone

    Use of the EndoPAT system to measure blood vessel tone.

    Measured: single time point

  26. Pulmonary function

    Forced expiratory lung volume test

    Measured: single time point

  27. Pulmonary inflammation

    Pulmonary inflammation measured as exhaled nitric oxide (NO)

    Measured: single time point

  28. Executive function

    Executive function will be assessed using Cambridge Neuropsychological Test Automated Battery (CANTAB) and Iowa Gambling Task

    Measured: single time point

  29. Cognitive function

    Measured by Wechsler Abbreviated Standard Intelligence test.

    Measured: single time point

  30. Aerobic fitness assessment

    Pulse rate (bpm) and recovery after a 3 min YMCA Step Test

    Measured: single time point

  31. Submaximal oxygen consumption

    The submaximal volume of oxygen consumed during a 4 minute treadmill walking protocol (VO2max) (ml/kg*min)

    Measured: single time point

  32. Physical activity

    Use of an accelerometer worn on the hip for 7 days

    Measured: daily, for 7 days

  33. Usual physical activity

    Activity recall using a questionnaire

    Measured: single time point

  34. Heart rate variability and autonomic nerve conductivity

    Monitoring of autonomic balance, cardiac performance, and respiratory measurements and activity using MindWare Mobile Impedance Cardiograph.

    Measured: single time point

  35. Allostatic Load

    An aggregate score derived from measures of urinary cortisol, norepinephrine, epinephrine, blood cholesterol, high sensitivity c-reactive protein, and hemoglobin A1C.

    Measured: single time point

  36. Baseline and change in salivary cortisol in response to test meal

    Salivary cortisol measured by enzyme-linked immunosorbent assay (ELISA)

    Measured: 0, immediately post-prandial, 30, 60, and 90 minutes post-prandial

  37. Baseline and change in salivary cortisol in response to exercise

    Salivary cortisol measured by enzyme-linked immunosorbent assay (ELISA)

    Measured: 0, immediately post-exercise, 30, 60, and 90 minutes post-exercise

  38. Baseline and change in salivary cortisol in response to emotional recall task

    Salivary cortisol measured by enzyme-linked immunosorbent assay (ELISA)

    Measured: 0, immediately post-task, 30, 60, and 90 minutes post-task

  39. Baseline and change in breath aldehydes

    The concentration of aldehydes present in human breath before and after a high-fat meal will be measured by mass spectrometry

    Measured: 0, 1, 4 and 6 hours postprandial

Timeline

From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.

  1. First posted20 Feb 2015 (estimated)
  2. Study startMay 2015
  3. Primary completion24 Jul 2019
  4. Study completion24 Jul 2019

Resources

More details

For doctors and researchers: how the study is designed, who runs it, and its registry IDs.

Study design
Study type
Observational
Observational model
Other
Time perspective
Cross-sectional
Enrolment
393 participants (actual)
IDs, dates and publications
ClinicalTrials.gov ID
NCT02367287
Sponsor's protocol ID
691654
Other IDs
2032-53000-001-00
Status last verified
Mar 2026
First submitted
12 Feb 2015
Last updated
25 Mar 2026
Results posted
No
Data monitoring committee
No

Publications

  • Wopereis S, Wolvers D, van Erk M, Gribnau M, Kremer B, van Dorsten FA, Boelsma E, Garczarek U, Cnubben N, Frenken L, van der Logt P, Hendriks HF, Albers R, van Duynhoven J, van Ommen B, Jacobs DM. Assessment of inflammatory resilience in healthy subjects using dietary lipid and glucose challenges. BMC Med Genomics. 2013 Oct 27;6:44. doi: 10.1186/1755-8794-6-44.

    PubMed 24160467
  • Pellis L, van Erk MJ, van Ommen B, Bakker GC, Hendriks HF, Cnubben NH, Kleemann R, van Someren EP, Bobeldijk I, Rubingh CM, Wopereis S. Plasma metabolomics and proteomics profiling after a postprandial challenge reveal subtle diet effects on human metabolic status. Metabolomics. 2012 Apr;8(2):347-359. doi: 10.1007/s11306-011-0320-5. Epub 2011 May 28.

    PubMed 22448156
  • Krug S, Kastenmuller G, Stuckler F, Rist MJ, Skurk T, Sailer M, Raffler J, Romisch-Margl W, Adamski J, Prehn C, Frank T, Engel KH, Hofmann T, Luy B, Zimmermann R, Moritz F, Schmitt-Kopplin P, Krumsiek J, Kremer W, Huber F, Oeh U, Theis FJ, Szymczak W, Hauner H, Suhre K, Daniel H. The dynamic range of the human metabolome revealed by challenges. FASEB J. 2012 Jun;26(6):2607-19. doi: 10.1096/fj.11-198093. Epub 2012 Mar 16.

    PubMed 22426117
  • Robles Alonso V, Guarner F. Linking the gut microbiota to human health. Br J Nutr. 2013 Jan;109 Suppl 2:S21-6. doi: 10.1017/S0007114512005235.

    PubMed 23360877
  • Baldiviez LM, Keim NL, Laugero KD, Hwang DH, Huang L, Woodhouse LR, Burnett DJ, Zerofsky MS, Bonnel EL, Allen LH, Newman JW, Stephensen CB. Design and implementation of a cross-sectional nutritional phenotyping study in healthy US adults. BMC Nutr. 2017 Oct 19;3:79. doi: 10.1186/s40795-017-0197-4. eCollection 2017.

    PubMed 32153856
  • Oliver A, Alkan Z, Stephensen CB, Newman JW, Kable ME, Lemay DG. Diet, Microbiome, and Inflammation Predictors of Fecal and Plasma Short-Chain Fatty Acids in Humans. J Nutr. 2024 Nov;154(11):3298-3311. doi: 10.1016/j.tjnut.2024.08.012. Epub 2024 Aug 20.

    PubMed 39173973
  • James KL, Gertz ER, Kirschke CP, Allayee H, Huang L, Kable ME, Newman JW, Stephensen CB, Bennett BJ. Trimethylamine N-Oxide Response to a Mixed Macronutrient Tolerance Test in a Cohort of Healthy United States Adults. Int J Mol Sci. 2023 Jan 20;24(3):2074. doi: 10.3390/ijms24032074.

    PubMed 36768394
  • Riazati N, Kable ME, Newman JW, Adkins Y, Freytag T, Jiang X, Stephensen CB. Associations of microbial and indoleamine-2,3-dioxygenase-derived tryptophan metabolites with immune activation in healthy adults. Front Immunol. 2022 Sep 29;13:917966. doi: 10.3389/fimmu.2022.917966. eCollection 2022.

    PubMed 36248784
  • Chin EL, Huang L, Bouzid YY, Kirschke CP, Durbin-Johnson B, Baldiviez LM, Bonnel EL, Keim NL, Korf I, Stephensen CB, Lemay DG. Association of Lactase Persistence Genotypes (rs4988235) and Ethnicity with Dairy Intake in a Healthy U.S. Population. Nutrients. 2019 Aug 10;11(8):1860. doi: 10.3390/nu11081860.

    PubMed 31405126
  • Bouzid YY, Arsenault JE, Bonnel EL, Cervantes E, Kan A, Keim NL, Lemay DG, Stephensen CB. Effect of Manual Data Cleaning on Nutrient Intakes Using the Automated Self-Administered 24-Hour Dietary Assessment Tool (ASA24). Curr Dev Nutr. 2021 Feb 2;5(3):nzab005. doi: 10.1093/cdn/nzab005. eCollection 2021 Mar.

    PubMed 33763626
  • Lemay DG, Baldiviez LM, Chin EL, Spearman SS, Cervantes E, Woodhouse LR, Keim NL, Stephensen CB, Laugero KD. Technician-Scored Stool Consistency Spans the Full Range of the Bristol Scale in a Healthy US Population and Differs by Diet and Chronic Stress Load. J Nutr. 2021 Jun 1;151(6):1443-1452. doi: 10.1093/jn/nxab019.

    PubMed 33704458
  • Arrington CE, Tacad DKM, Allayee H, Sutton KJ, Dombroski C, Keim NL, Newman JW, Bennett BJ. Genetic determinants of BMI, diet, and fitness interact to partially explain anthropometric obesity traits but not the metabolic consequences of obesity in men and women. Int J Obes (Lond). 2026 Apr;50(4):938-946. doi: 10.1038/s41366-026-02027-0. Epub 2026 Feb 20.

    PubMed 41720915
  • Blecksmith SE, Oliver A, Alkan Z, Lemay DG. Gut Microbiome Genes Involved in Plant and Mucin Breakdown Correlate with Diet and Gastrointestinal Inflammation in Healthy United States Adults. J Nutr. 2025 Nov;155(11):3757-3768. doi: 10.1016/j.tjnut.2025.08.027. Epub 2025 Sep 1.

    PubMed 40902732
  • Tang Y, Oliver A, Alkan Z, Korf I, Huang L, Kable ME, Lemay DG. Association of lactose intake and lactase persistence genotype with microbial taxa and function in healthy multi-ethnic U.S. adults. Food Funct. 2025 Sep 15;16(18):7393-7407. doi: 10.1039/d5fo01640a.

    PubMed 40880079
  • Tacad DKM, Borkowski K, Keim NL. Differential associations of eating behavior traits, food preference, motivations of food choice on diet intake and diet quality in adult females and males from the USDA nutritional phenotyping study. Appetite. 2025 Sep 1;213:108048. doi: 10.1016/j.appet.2025.108048. Epub 2025 May 7.

    PubMed 40339649

Questions about this trial

What is this clinical trial studying?

An observational study of Obesity and Inflammation, run by USDA, Western Human Nutrition Research Center at 1 site in United States.

The full registered description is in the About this study section and the official record.

Who may be eligible to take part?

The sponsor lists 3 inclusion and 19 exclusion criteria. Eligibility is decided by the study team after screening, so read the full criteria and contact a listed site.

Is this clinical trial currently recruiting?

The record says: finished, as of the sponsor's last update on 25 Mar 2026. Status can change between updates, so confirm with the study contact before making plans.

Where is the study taking place?

The record lists 1 site in United States. Whether a site is taking part right now should be confirmed with that site. See every site.

What are the possible benefits and risks?

They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.

Are results available for this study?

The study is completed, but results are not available in the source record. That does not mean the treatment did or did not work.

How can a doctor refer a patient or contact the research team?

The record lists no contact. The official record names the sponsor, who can be asked directly. AzTrials does not enrol participants or take referrals.

What does the primary outcome measure?

Baseline level and change in systemic immune activation following challenge meal (time frame: 0, 0.5, 3, and 6 hours postprandial). The study lists 2 primary outcomes in all. It is what the study was designed to measure, not a finding.

Where can I read the original study information?

On the ClinicalTrials.gov record for NCT02367287, which also lists 31 linked publications.

Does a listing mean the treatment is approved or proven to work?

No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.

How often is this information updated?

AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 25 Mar 2026.

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