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Gastrointestinal Stromal TumorsNCT05867901

A Prospective Study on Predicting Recurrence Risk of Postoperative High-risk GISTs in NED State Based on MRD Detection Via Liquid Biopsy

An observational study of Gastrointestinal Stromal Tumors, run by Peking University People's Hospital at 1 site in China.

Suspended

Paused. Enrolment is on hold for now and may resume.

Official record
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Trial summary

The goal of this single-center, prospective, observational cohort study is to learn whether tumor-informed minimal residual disease (MRD) testing in blood can predict recurrence in 66 patients with high-risk gastrointestinal stromal tumor (GIST) who are not currently receiving postoperative adjuvant therapy. Read more about this study

Who is it for?
Ages 18 to 75 years
Conditions the study is for
Gastrointestinal Stromal Tumors
What is being tested?
Tumor-Informed ctDNA-Based MRD Testing and Contrast-Enhanced CT
How many people
66 participants
Where
1 siteChina
Study dates
1 Jun 2023to 31 Dec 2028
Phase
Observational
Are there results?
None posted in the registry

Key requirements

Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.

  • Ages 18 to 75 years
  • All sexes
  • No healthy volunteers
  • Adult, Older adult

Study population: Patients aged 18 to 75 years with pathologically confirmed high-risk gastrointestinal stromal tumor who have undergone R0 resection of the primary tumor and meet the protocol-defined eligibility criteria for postoperative MRD surveillance.

Who may be able to join

  • Inclusion Criteria for the Prospective Study on Postoperative Minimal Residual Disease (MRD) Surveillance in High-Risk Gastrointestinal Stromal Tumors (GIST) Without Adjuvant Therapy
  • Aged 18-75 years.
  • Patients suspected of having high-risk GIST based on preoperative imaging, or patients with biopsy-confirmed high-risk GIST who have not received preoperative neoadjuvant therapy.
  • Treatment-naive patients who have not previously received radiotherapy, chemotherapy, surgery, or any other anticancer treatment.
  • Adequate hepatic, renal, and other major organ function, with the patient considered medically fit to undergo surgery.
  • Postoperative pathological confirmation of gastrointestinal stromal tumor.
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  • Tumor genotyping demonstrating a genotype associated with primary resistance to imatinib, such as a PDGFRA D842V mutation, or a clear decision by the patient to decline postoperative adjuvant imatinib therapy.
  • A definite contraindication to imatinib or another targeted therapy.
  • Patients who underwent R0 resection of the primary tumor, completed long-term postoperative adjuvant therapy, and discontinued treatment at least 3 months previously.
  • The patient and family members are able to understand the study protocol; the patient voluntarily agrees to participate and provides written informed consent.
  • Inclusion Criteria for the Development of a Genomics-Based Recurrence Risk Prediction Model for High-Risk GIST and Identification of the Optimal Target Population for MRD Surveillance a. The inclusion criteria are identical to those of the prospective study on postoperative MRD surveillance in high-risk GIST without adjuvant therapy.

Who cannot join

  • Exclusion Criteria for the Prospective Study on Postoperative Minimal Residual Disease (MRD) Surveillance in High-Risk Gastrointestinal Stromal Tumors (GIST) Without Adjuvant Therapy
  • A history of another malignant tumor or the presence of another concurrent malignancy.
  • Emergency surgery required because of intestinal obstruction, perforation, bleeding, or a similar condition.
  • Pregnancy or breastfeeding.
  • A history of severe psychiatric illness.
  • Any contraindication to surgical treatment.
Show all 12Show fewer
  • Failure to achieve R0 resection.
  • Low- or intermediate-risk disease according to postoperative pathological risk stratification.
  • Presence of distant metastasis.
  • Any other condition that, in the investigator's judgment, renders the patient unsuitable for enrollment.
  • Exclusion Criteria for the Development of a Genomics-Based Recurrence Risk Prediction Model for High-Risk GIST and Identification of the Optimal Target Population for MRD Surveillance
  • The exclusion criteria are identical to those of the prospective study on postoperative MRD surveillance in high-risk GIST without adjuvant therapy.

Trial locations and contacts

1 site in 1 country.

China1 site
  • Peking University People's Hospital

    Beijing, Beijing Municipality, 100044

Other trials in China

About this study

Official title: A Prospective Study on Predicting Recurrence Risk of Postoperative High-risk Gastrointestinal Stromal Tumors in NED State Based on Minimal Residual Disease Detection Via Liquid Biopsy

The goal of this single-center, prospective, observational cohort study is to learn whether tumor-informed minimal residual disease (MRD) testing in blood can predict recurrence in 66 patients with high-risk gastrointestinal stromal tumor (GIST) who are not currently receiving postoperative adjuvant therapy. The main questions it aims to answer are:

Can changes in MRD during follow-up predict tumor recurrence? How closely do MRD results agree with contrast-enhanced computed tomography (CT) findings, and can MRD identify recurrence earlier than CT? Can tumor genomic features, changes in MRD, and clinicopathological features be combined to develop a model for predicting recurrence risk? Participants will have their surgical tumor tissue analyzed, provide blood samples for MRD testing, and undergo regular clinical follow-up and contrast-enhanced CT examinations for 3 years. Participants may choose to receive and discuss their MRD results. This study will not assign or change treatment based on MRD results. Recurrence and treatment decisions will remain based on routine clinical assessment, primarily contrast-enhanced CT and multidisciplinary review.

Read the detailed description

This is a single-center, prospective, single-cohort, non-interventional observational study. The prospective cohort will include 66 patients with high-risk gastrointestinal stromal tumor (GIST) who have undergone R0 resection of the primary tumor. Eligible patients will either have no plan to receive postoperative adjuvant therapy or meet protocol-defined eligibility criteria after discontinuing such therapy.

Baseline tumor tissue will undergo whole-exome sequencing (WES) and next-generation sequencing (NGS). Fifty patient-specific variants associated with tumor development, progression, and individualized treatment will be selected to construct a personalized testing module. Cell-free DNA from peripheral blood will be analyzed using unique molecular identifier-based ultra-deep targeted NGS at a sequencing depth of approximately 100,000×. MRD positivity is defined as the detection of at least two significant loci with P ≤ 0.005.

Baseline contrast-enhanced computed tomography (CT) will confirm no evidence of disease before enrollment. Contrast-enhanced CT will be repeated every 3 months during 3 years of follow-up. Magnetic resonance imaging or positron emission tomography-CT may be performed when needed. Two experienced radiologists will independently review the CT images. Disagreements will be adjudicated by a third radiologist. Imaging recurrence will be evaluated according to Response Evaluation Criteria in Solid Tumors version 1.1 and confirmed by a multidisciplinary team.

Blood-based MRD testing will be performed at baseline and at protocol-specified follow-up visits. The study will compare MRD results with CT-based recurrence assessments and evaluate the predictive performance of MRD. It will also estimate the interval between the first MRD signal of recurrence and CT-confirmed recurrence.

The study will not assign or modify treatment. Participants who choose to receive their MRD results will receive a standardized explanation that the results are investigational. MRD results cannot independently establish a diagnosis of recurrence or guide treatment decisions. Participants who initiate a tyrosine kinase inhibitor (TKI) before imaging-confirmed recurrence may remain in follow-up. The primary MRD performance analysis will include only MRD, imaging, and clinical data collected before TKI initiation. Post-TKI recurrence status will not be used to reclassify pre-TKI MRD results in the primary MRD performance analysis.

After 3-year outcomes become available, data from the 66 prospective participants and 49 retrospective cases will be used to develop a recurrence-risk prediction model. The combined cohort will be randomly divided into training and internal test sets using an 8:2 stratified split. Candidate variables will first be screened using area under the receiver operating characteristic curve and missingness criteria. Least absolute shrinkage and selection operator Cox regression will then be used to select key predictors.

An extreme gradient boosting model will be optimized using five-fold cross-validation. Internal validation will be performed using 200 bootstrap resamples. An earlier cohort of 45 patients with high-risk GIST from the same center will initially serve as an external validation set. Model performance will be evaluated using the area under the curve, concordance index, calibration curves, accuracy, sensitivity, and specificity.

Being tested
Tumor-Informed ctDNA-Based MRD Testing, Contrast-Enhanced CT
Keywords
Gastrointestinal Stromal Tumors, Minimal Residual Disease, Adjuvant Therapy, Prognosis, Liquid Biopsy
Medical subject headings
Gastrointestinal Stromal Tumors, Neoplasm, Residual

What participants receive

What participants receive. In a randomised study each person is assigned to one group by chance.

  • Tumor-Informed ctDNA-Based MRD TestingDiagnostic test

    Patient-specific variants will be selected from tumor tissue sequencing and used for serial ctDNA-based MRD testing of peripheral blood samples during follow-up. MRD results are investigational and will not independently guide treatment decisions.

  • Contrast-Enhanced CTDiagnostic test

    Contrast-enhanced CT will be performed before enrollment to confirm no evidence of disease and every 3 months during 3 years of follow-up. MRI or PET-CT may be used when needed. Imaging-confirmed recurrence will be reviewed by a multidisciplinary team.

Study groups in NCT05867901
Study groupRoleWhat they receive
High-Risk GIST MRD Monitoring CohortPatients with high-risk gastrointestinal stromal tumor who have undergone R0 resection of the primary tumor and are not currently receiving postoperative adjuvant therapy will undergo serial blood-based ctDNA-MRD testing and routine imaging follow-up for 3 years. The study will not assign or modify treatment.
Receives: Diagnostic Test: Tumor-Informed ctDNA-Based MRD Testing; Diagnostic Test: Contrast-Enhanced CT

What is being measured

The primary outcome is the main question the study is designed to answer.

  1. Agreement Between MRD and Contrast-Enhanced CT Recurrence Assessments

    At each scheduled follow-up visit, agreement between MRD status (positive or negative) and recurrence status determined by contrast-enhanced CT and multidisciplinary review will be evaluated using Cohen's kappa coefficient with a 95% confidence interval.

    Measured: From baseline through 3 years of follow-up or until imaging-confirmed recurrence.

  2. Three-Year Recurrence Rate

    The percentage of participants with local recurrence or distant metastasis confirmed by contrast-enhanced CT and multidisciplinary review during the 3-year follow-up period.

    Measured: At the end of the 3-year follow-up.

Secondary outcomes (7)
  1. Predictive Performance of MRD for Imaging-Confirmed Recurrence

    Using recurrence confirmed by contrast-enhanced CT and multidisciplinary review as the reference standard, MRD sensitivity, specificity, positive predictive value, and negative predictive value will be calculated.

    Measured: From baseline through the end of the 3-year follow-up.

  2. Lead Time From MRD Positivity to CT-Confirmed Recurrence

    Among participants with imaging-confirmed recurrence and an earlier MRD-positive result, the interval between the first MRD-positive result and the first CT-confirmed recurrence will be calculated.

    Measured: During the 3-year follow-up, through the first CT-confirmed recurrence.

  3. Recurrence-Free Survival

    Recurrence-free survival is defined as the time from the date of surgery to the first imaging-confirmed local recurrence or distant metastasis.

    Measured: From the date of surgery through the end of the 3-year follow-up.

  4. Overall Survival

    Overall survival is defined as the time from the date of surgery to death from any cause. Participants who remain alive will be censored at the date they were last known to be alive.

    Measured: From the date of surgery through the end of the 3-year follow-up.

  5. Longitudinal Changes in ctDNA-MRD Genomic Features

    Detected ctDNA variants and ctDNA levels will be summarized at protocol-specified time points. Their longitudinal changes and associations with recurrence-free survival and overall survival will be explored.

    Measured: At baseline and protocol-specified follow-up visits for up to 3 years.

  6. MRD Positivity According to Clinicopathological and Genomic Factors

    MRD positivity will be assessed according to clinicopathological features, tumor genomic features, and ctDNA-MRD characteristics. Univariable and multivariable analyses will be used to identify factors associated with MRD positivity.

    Measured: After completion of the 3-year follow-up and data collection.

  7. Performance of the Recurrence-Risk Prediction Model

    Model performance will be evaluated using the area under the receiver operating characteristic curve, concordance index with 95% confidence intervals, calibration curves, accuracy, sensitivity, and specificity.

    Measured: After completion of the 3-year follow-up and model development and validation.

Timeline

From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.

  1. First posted22 May 2023
  2. Study start1 Jun 2023
  3. Primary completion31 Dec 2028 (estimated)
  4. Study completion31 Dec 2028 (estimated)

Why it stopped: Enrollment has been temporarily paused pending ethics review and implementation of the revised study protocol. Follow-up of previously enrolled participants is continuing.

Resources

More details

For doctors and researchers: how the study is designed, who runs it, and its registry IDs.

Study design
Study type
Observational
Observational model
Cohort
Time perspective
Prospective
Enrolment
66 participants (estimated)
IDs, dates and publications
ClinicalTrials.gov ID
NCT05867901
Sponsor's protocol ID
21510004487
Other IDs
2026-2-408
Status last verified
Aug 2026
First submitted
23 Apr 2023
Last updated
25 Aug 2026
Results posted
No
Data monitoring committee
Yes
FDA-regulated drug
No
FDA-regulated device
No
Individual data sharing
Undecided

Publications

  • Gao ZD, Cheng BS, Bao YD, et al. Personalized tumor-informed circulating tumor DNA analysis in monitoring recurrence following resection of high-risk stage II-III gastrointestinal stromal tumor. J Clin Oncol. 2024;42(16 Suppl):11534.

  • Dermawan JK, Kelly C, Gao Z, Smith S, Jadeja B, Singer S, Tap WD, Chi P, Antonescu CR. Novel Genomic Risk Stratification Model for Primary Gastrointestinal Stromal Tumors (GIST) in the Adjuvant Therapy Era. Clin Cancer Res. 2023 Oct 2;29(19):3974-3985. doi: 10.1158/1078-0432.CCR-23-1184.

    PubMed 37477937
  • Jilg S, Rassner M, Maier J, Waldeck S, Kehl V, Follo M, Philipp U, Sauter A, Specht K, Mitschke J, Lange T, Bauer S, Jost PJ, Peschel C, Duyster J, Gaiser T, Hohenberger P, von Bubnoff N. Circulating cKIT and PDGFRA DNA indicates disease activity in Gastrointestinal Stromal Tumor (GIST). Int J Cancer. 2019 Oct 15;145(8):2292-2303. doi: 10.1002/ijc.32282. Epub 2019 Apr 29.

    PubMed 30882891
  • Blay JY, Schiffler C, Bouche O, Brahmi M, Duffaud F, Toulmonde M, Landi B, Lahlou W, Pannier D, Bompas E, Bertucci F, Chaigneau L, Collard O, Pracht M, Henon C, Ray-Coquard I, Armoun K, Salas S, Spalato-Ceruso M, Adenis A, Verret B, Penel N, Moreau-Bachelard C, Italiano A, Dufresne A, Metzger S, Chabaud S, Perol D, Le Cesne A. A randomized study of 6 versus 3 years of adjuvant imatinib in patients with localized GIST at high risk of relapse. Ann Oncol. 2024 Dec;35(12):1157-1168. doi: 10.1016/j.annonc.2024.08.2343. Epub 2024 Sep 4.

    PubMed 39241959
  • Dematteo RP, Ballman KV, Antonescu CR, Maki RG, Pisters PW, Demetri GD, Blackstein ME, Blanke CD, von Mehren M, Brennan MF, Patel S, McCarter MD, Polikoff JA, Tan BR, Owzar K; American College of Surgeons Oncology Group (ACOSOG) Intergroup Adjuvant GIST Study Team. Adjuvant imatinib mesylate after resection of localised, primary gastrointestinal stromal tumour: a randomised, double-blind, placebo-controlled trial. Lancet. 2009 Mar 28;373(9669):1097-104. doi: 10.1016/S0140-6736(09)60500-6. Epub 2009 Mar 18.

    PubMed 19303137
  • Joensuu H, Vehtari A, Riihimaki J, Nishida T, Steigen SE, Brabec P, Plank L, Nilsson B, Cirilli C, Braconi C, Bordoni A, Magnusson MK, Linke Z, Sufliarsky J, Federico M, Jonasson JG, Dei Tos AP, Rutkowski P. Risk of recurrence of gastrointestinal stromal tumour after surgery: an analysis of pooled population-based cohorts. Lancet Oncol. 2012 Mar;13(3):265-74. doi: 10.1016/S1470-2045(11)70299-6. Epub 2011 Dec 6.

    PubMed 22153892

Questions about this trial

What is this clinical trial studying?

An observational study of Gastrointestinal Stromal Tumors, run by Peking University People's Hospital at 1 site in China.

The full registered description is in the About this study section and the official record.

Who may be eligible to take part?

The sponsor lists 11 inclusion and 12 exclusion criteria. Eligibility is decided by the study team after screening, so read the full criteria and contact a listed site.

Is this clinical trial currently recruiting?

The record says: paused, as of the sponsor's last update on 25 Aug 2026. Status can change between updates, so confirm with the study contact before making plans.

Where is the study taking place?

The record lists 1 site in China. Whether a site is taking part right now should be confirmed with that site. See every site.

What are the possible benefits and risks?

They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.

Are results available for this study?

Results are not available in the source record.

How can a doctor refer a patient or contact the research team?

The record lists no contact. The official record names the sponsor, who can be asked directly. AzTrials does not enrol participants or take referrals.

What does the primary outcome measure?

Agreement Between MRD and Contrast-Enhanced CT Recurrence Assessments (time frame: From baseline through 3 years of follow-up or until imaging-confirmed recurrence.). The study lists 2 primary outcomes in all. It is what the study was designed to measure, not a finding.

Where can I read the original study information?

On the ClinicalTrials.gov record for NCT05867901, which also lists 6 linked publications.

Does a listing mean the treatment is approved or proven to work?

No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.

How often is this information updated?

AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 25 Aug 2026.

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