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NeoplasmsNCT06628570

Screening Strategies Among High-risk Populations for Anal Cancer

A study testing HRA + Biopsy, Anal Cytology and Genotyping of anal hrHPV infection in people with Neoplasms and HPV-Related Anal Squamous Cell Carcinoma, run by Lisa Flowers at 4 sites in United States.

Recruiting

Looking for participants now. Contact the study team or a site below to ask about taking part.

Sites and contacts
Official record
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Trial summary

The goal of the proposed research is to 1) examine the performance of emerging screening methods for anal high-grade squamous intraepithelial lesion (aHSIL), a precancerous condition of anal cancer, among populations at high risk for anal cancer and 2) characterize DNA methylation, immunologic response, and… Read more about this study

Who is it for?
Ages 30 to 80 yearsHealthy volunteers can take part
What is being tested?
HRA + Biopsy, Anal Cytology and Genotyping of anal hrHPV infection
Could I receive a placebo?
No, everyone receives an active treatment
How many people
500 participants
Where
4 sitesUnited States
Study dates
16 Dec 2024to 31 Aug 2028
Phase
Interventional
Are there results?
Not yet: the study is under way

Key requirements

Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.

  • Ages 30 to 80 years
  • All sexes
  • Healthy volunteers accepted
  • Adult, Older adult

Who may be able to join

  • 30-80 years of age
  • Individuals with chronic impaired immune status
  • History of lower genital tract neoplasia (LGTN), Zubrod Performance Status of 0-2

Who cannot join

  • Patients treated for aHSIL less than 6 months before screening
  • History of anal cancer and pregnant women.

Trial locations and contacts

4 sites in 1 country. Contact the study team or a site near you to ask about taking part.

Lisa Flowers, MD, MPH contact

404-251-8931

lflowe2@emory.edu

United States4 sites, 4 recruiting
  • Grady Memorial Hospital

    Atlanta, Georgia, 30303

    Recruiting
  • The Ponce Center

    Atlanta, Georgia, 30308

    Lisa Flowers, MD, 404 778 1380, lflowe2@emory.edu

    Recruiting
  • University of Miami Miller School of Medicine-Sylvester Cancer Center

    Miami, Florida, 33136

    Isabella Rosa-Cunah, MD

    Recruiting
  • University of Miami School of Medicine at Jackson Memorial Hospital (JMH)

    Miami, Florida, 33136

    Isabella Rosa-Cunha, MD

    Recruiting

Other trials in United States

About this study

The goal of the proposed research is to 1) examine the performance of emerging screening methods for anal high-grade squamous intraepithelial lesion (aHSIL), a precancerous condition of anal cancer, among populations at high risk for anal cancer and 2) characterize DNA methylation, immunologic response, and environmental factors associated with aHSIL.

Read the detailed description

Anal cancer, caused by persistent infection with high-risk human papillomavirus (hrHPV), is typically preceded by anal high-grade squamous intraepithelial lesions (aHSIL). The incidence and mortality of advanced anal cancer has been increasing in the U.S., with the greatest burden of disease and mortality in individuals with chronic impairment of the immune system. The study is important because the incidence of anal cancer is particularly high among certain groups. Findings will provide much-needed evidence for anal cancer screening strategies to reduce incidence of anal cancer and improve health outcomes. The study population includes individuals with chronic impairment of the immune system and females with a known history of high-grade lower genital tract neoplasia.

The study procedures include filling out self-reported questionnaires and collecting biosamples for study-related assays. HRA is part of the standard clinic procedure for this group of participants. Collected biosamples will be banked for future research use. In-person or remote signed consent may occur for the study.

Being tested
HRA + Biopsy, Anal Cytology, Genotyping of anal hrHPV infection, CINtec®PLUS
Keywords
Cancer, HIV, Screening
Medical subject headings
Neoplasms

What participants receive

What participants receive. In a randomised study each person is assigned to one group by chance.

  • HRA + BiopsyDiagnostic test

    Also called HRA and Histology

    High-Resolution Anoscopy, or HRA, is a standard of care procedure for screening and detection of premalignant lesions of the anus. Using a small, thin round tube called an anoscope, the anal canal is examined with a high-resolution magnifying instrument called a colposcope. The application of a mildly acidic liquid on the anal canal facilitates the evaluation of abnormal tissue such as anal dysplasia. Biopsies for histological confirmation of disease will be taken. Biopsies' reporting will follow the terminology, criteria, and recommendations of the Lower Anogenital Squamous Terminology (LAST) project. Histology results will be reported as benign, condyloma acuminatum, AIN grades 1-3, or cancer. For the proposed project, aHSIL+ will be defined as AIN2 (p16 block-positive), AIN3, and cancer at the HRA encounter. All other cases will be classified as <aHSIL, including benign, condyloma acuminatum, and AIN1

  • Anal CytologyDiagnostic test

    Also called Swab anal Sample

    Anal cytology collection (swab samples) will be performed as part of the standard of care during this study. The collected cells, suspended in the SurePath liquid-based medium, will be placed on a slide and microscopically examined by a board-certified pathologist. The sample will then be interpreted using the Bethesda System: negative for intraepithelial lesion or malignancy (NILM), ASCUS, LSIL, ASC-H, or HSIL. Pathologists interpreting the anal cytology will be blinded from hrHPV testing and biopsy histology.

  • Genotyping of anal hrHPV infectionDiagnostic test

    Also called hrHPV

    Samples of exfoliated cells from the anal canal will be collected with Dacron swabs. To identify the infecting HPV genotype, DNA will be extracted from swab samples collected with the MagNA Pure LC DNA Isolation Kit III and an LC MagNA Pure system (Roche Diagnostics GmbH, Mannheim, Germany), followed by HPV typing using the TypeSeq assay, a laboratory prepared high-throughput next-generation sequencing assay developed by NCI will be performed as described. The assay uses three sequential PCR steps resulting in barcoded L1 amplicons sequenced and submitted to a bioinformatics pipeline for typing. This TypeSeq assay qualitatively detects and identifies 51 HPV genotypes (HPV types 3, 6, 11, 13, 16, 18, 26, 28, 30, 31, 32, 33, 34, 35, 39, 40, 42, 43, 44, 45, 51, 52, 53, 54, 56, 58, 59, 61, 62, 66, 67, 68, 69, 70, 71, 72, 73, 74, 76, 81, 82, 83, 84, 85, 86, 87, 89, 90, 91, 97, and 114), including 14 high-risk (16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, 68)

  • CINtec®PLUSDiagnostic test

    Also called P16/Ki-67 dual immunostaining

    Samples of exfoliated cells from the anal canal will be collected with Dacron swabs. Dual immunostaining with p16/Ki-67 will be performed on the residual cytologic specimen by Roche MTM Laboratories (Heidelberg, Germany), using the CINtec®PLUS Kit according to the manufacturer's instructions. The anal cytology material will be stained with a mouse monoclonal antibody directed against human p16INKa (p16) protein (clone E6H4) and recombinant rabbit monoclonal antibody directed against human Ki-67 protein (clone 274-11AC3V1), using the BenchMark ULTRA instrument (Ventana Roche). Samples with insufficient cellularity will be excluded from the evaluation. A trained cytotechnologist will review all cases for cells staining positively with both markers. A slide will be considered positive if 1 or more squamous epithelial cell(s) stained positive for both p16 and Ki-67 and dual stain-positive cells will be semi-quantitatively assessed (0, 1, 2-5, 6-50, >50).

Study groups in NCT06628570
Study groupRoleWhat they receive
Men with impaired immune statusOtherAt each study visit, participants will receive a digital anorectal examination followed by HRA, with directed biopsies of suspicious lesions. An HRA-certified physician will collect anal swabs and HRA-directed biopsies for histological confirmation of disease and biomarker assays.
Receives: Diagnostic Test: HRA + Biopsy; Diagnostic Test: Anal Cytology; Diagnostic Test: Genotyping of anal hrHPV infection; Diagnostic Test: CINtec®PLUS
Men without impaired immune statusOtherAt each study visit, participants will receive a digital anorectal examination followed by HRA, with directed biopsies of suspicious lesions. An HRA-certified physician will collect anal swabs and HRA-directed biopsies for histological confirmation of disease and biomarker assays.
Receives: Diagnostic Test: HRA + Biopsy; Diagnostic Test: Anal Cytology; Diagnostic Test: Genotyping of anal hrHPV infection; Diagnostic Test: CINtec®PLUS
Women with impaired immune status and and lower genital tract neoplasia (LGTN)OtherAt each study visit, participants will receive a digital anorectal examination followed by HRA, with directed biopsies of suspicious lesions. An HRA-certified physician will collect anal swabs and HRA-directed biopsies for histological confirmation of disease and biomarker assays.
Receives: Diagnostic Test: HRA + Biopsy; Diagnostic Test: Anal Cytology; Diagnostic Test: Genotyping of anal hrHPV infection; Diagnostic Test: CINtec®PLUS
Women without impaired immune status and lower genital tract neoplasia (LGTN)OtherAt each study visit, participants will receive a digital anorectal examination followed by HRA, with directed biopsies of suspicious lesions. An HRA-certified physician will collect anal swabs and HRA-directed biopsies for histological confirmation of disease and biomarker assays.
Receives: Diagnostic Test: HRA + Biopsy; Diagnostic Test: Anal Cytology; Diagnostic Test: Genotyping of anal hrHPV infection; Diagnostic Test: CINtec®PLUS

What is being measured

The primary outcome is the main question the study is designed to answer.

  1. Specificity and Sensitivity of screening markers

    Sensitivity and specificity will be calculated for each of the proposed screening markers separately and a combination of two and three markers for the detection of aHSIL at baseline. The combination of the two and three markers of primary interest includes CINtec®PLUS +hrHPV, CINtec®PLUS+anal cytology, hrHPV+anal cytology, and CINtec®PLUS+hrHPV+anal cytology. The analysis will be performed for the four high-risk groups together and stratified by the four high-risk categories.

    Measured: Baseline

Secondary outcomes (7)
  1. DNA methylation markers

    In these models, aHSIL status at baseline will be considered as the response, and each anal DNA methylation marker will be the predictor. Separate models will be performed for each methylation marker (ZNF582, ASCL1, ZIC1, SST, LHX8, WDR17, and ST6GALNAC5)

    Measured: Baseline, 1 year, 2 years

  2. Anal immune modulations

    High-risk HPV 16 persistent patients (N=10) vs. patients with no HPV at least two consecutive times (N=10). Each of the groups will also include aHSIL+ (N=5) vs. <aLSIL (N=5).

    Measured: Baseline, 1 year, 2 years

  3. aHSIL prevalence

    The prevalence of HSIL will be estimated as the proportion of participants who are HRA positive for HSIL at entry and its 95% confidence interval. Logistic regression analysis will be used to evaluate the association of potential risk factors with diagnosis of HSIL.

    Measured: Baseline

  4. aHSIL clearance

    Only people treated with aHSIL will be used for the clearance analysis. Clearance (HRA biopsy-proven) will be defined as no detectable aHSIL at the immediate one-year (for those with baseline aHSIL) or two-year (for those with newly diagnosed aHSIL cases at the one-year visit) follow-up visit after aHSIL treatment.

    Measured: 1 year, 2 years

  5. Inflammatory Markers (Il-1RA, IL1β, IL6, IL6sr, TNF-α, and IL-10)

    Anal swab concentrations of inflammatory markers (IL1ra, IL1β, IL6, IL6sr, TNF-α, and IL-10) will be determined using multiplex assays (Meso Scale Discovery, Rockville, MD) according to the manufacturer's protocol. All samples will be run in duplicates, and mean intra- and inter-assay CVs will be calculated and expected to be <10%. These inflammatory markers have been reliably found to be elevated in inflammatory-associated diseases including anal inflammation.

    Measured: Baseline, 1 year, 2 years

  6. Inflammatory Markers (sTNFR2 and interferon (IFN)-γ)

    Anal swab concentrations of inflammatory markers of inflammatory markers (sTNFR2 and interferon (IFN)-γ) will be determined using multiplex assays (Meso Scale Discovery, Rockville, MD) according to the manufacturer's protocol.

    Measured: Baseline, 1 year, 2 years

  7. Inflammatory Marker (CRP)

    Anal swab concentrations of inflammatory markers (CRP) will be determined using multiplex assays (Meso Scale Discovery, Rockville, MD) according to the manufacturer's protocol. All samples will be run in duplicates, and mean intra- and inter-assay CVs will be calculated and expected to be <10%.

    Measured: Baseline, 1 year, 2 years

Timeline

From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.

  1. First posted8 Oct 2024
  2. Study start16 Dec 2024
  3. Primary completion30 Sep 2027 (estimated)
  4. Study completion31 Aug 2028 (estimated)

Resources

More details

For doctors and researchers: how the study is designed, who runs it, and its registry IDs.

Study design
Study type
Interventional
Phase
Phase N/A
Primary purpose
Screening
Allocation
Non-randomised
Intervention model
Single group
Masking
None (open label)
Enrolment
500 participants (estimated)
IDs, dates and publications
ClinicalTrials.gov ID
NCT06628570
Sponsor's protocol ID
STUDY00006091
Other IDs
R01CA285198, 2025P011462
Status last verified
Aug 2026
First submitted
3 Oct 2024
Last updated
26 Aug 2026
Results posted
No
Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
Individual data sharing
Yes: All of the individual participant data collected from study participation will be available for sharing after deidentification

Questions about this trial

What is this clinical trial studying?

A study testing HRA + Biopsy, Anal Cytology and Genotyping of anal hrHPV infection in people with Neoplasms and HPV-Related Anal Squamous Cell Carcinoma, run by Lisa Flowers at 4 sites in United States.

The full registered description is in the About this study section and the official record.

Who may be eligible to take part?

The sponsor lists 3 inclusion and 2 exclusion criteria. Eligibility is decided by the study team after screening, so read the full criteria and contact a listed site.

Is this clinical trial currently recruiting?

The record says: looking for participants now, as of the sponsor's last update on 26 Aug 2026. Status can change between updates, so confirm with the study contact before making plans.

Where is the study taking place?

The record lists 4 sites in United States. Whether a site is taking part right now should be confirmed with that site. See every site.

What are the possible benefits and risks?

They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.

Are results available for this study?

This study is still under way. Results are not available in the source record yet.

How can a doctor refer a patient or contact the research team?

Contact Lisa Flowers, MD, MPH (404-251-8931, lflowe2@emory.edu), or a site near the patient. AzTrials does not enrol participants or take referrals.

What does the primary outcome measure?

Specificity and Sensitivity of screening markers (time frame: Baseline). It is what the study was designed to measure, not a finding.

Where can I read the original study information?
Does a listing mean the treatment is approved or proven to work?

No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.

How often is this information updated?

AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 26 Aug 2026.

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