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Leigh Syndrome (Maternally Inherited, MILS)cureMILSNCT06967831

Drug Repurposing for Mitochondrial Disorders Using iPSCs Derived Neural Cells

An observational study of Leigh Syndrome (Maternally Inherited, MILS) and Leigh Syndrome (AR, AD, XR), run by Charite University, Berlin, Germany at 2 sites in Germany.

Recruiting

Looking for participants now. Contact the study team or a site below to ask about taking part.

Sites and contacts
Official record
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Trial summary

In this project, the investigators are using iPSC lines derived from patients with Leigh syndrome that carry mutations in the mitochondrial (mtDNA) and in the nuclear DNA (nDNA) to reprogram them into neural progenitor cells and into dopaminergic neurons. Read more about this study

Who is it for?
Any age
What is being tested?
skin biopsy, generation of iPSCs and blood drawing
Type of treatment
Surgery or procedure
How many people
80 participants
Where
2 sitesGermany
Study dates
1 Mar 2020to 28 Feb 2030
Phase
Observational
Are there results?
Not yet: the study is under way

Key requirements

Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.

  • Ages Any age
  • All sexes
  • No healthy volunteers
  • Child, Adult, Older adult

Study population: Patients (male and female) who are affected by Leigh syndrome and carry a pathogenic mutation in a gene known to be associated with Leigh syndrome

Inclusion Criteria: 1. Patient has a disease causing mutation in one of the genes causing Leigh syndrome if mutated, 2. Patient has the characteristic cranial MRI abnormalities of Leigh syndrome

Exclusion Criteria: 1. bleeding disorder that precludes a skin biopsy, 2. retraction of consent

Trial locations and contacts

2 sites in 1 country. Contact the study team or a site near you to ask about taking part.

Alessandro Prigione, MD contact

+49 211 81 17687

alessandro.prigione@hhu.de

Germany2 sites, 2 recruiting
  • Charite - Universtaetsmedizin Berlin

    Berlin, State of Berlin, 13353

    Markus Prof. Dr. Schuelke, MD, +49 30 4505 66468, markus.schuelke@charite.de

    Recruiting
  • Universitätsklinikum Düsseldorf

    Düsseldorf, North Rhine-Westphalia, 40225

    Alessandro Prof. Dr. Prigione, MD, +49 211 81 17687, alessandro.prigione@hhu.de

    Recruiting

Other trials in Germany

About this study

Official title: Using iPSC Derived Human Basal Ganglia Neurons From Patients With Leigh Syndrome for Metabolic Studies, Assay Development, and Drug Repurposing.

In this project, the investigators are using iPSC lines derived from patients with Leigh syndrome that carry mutations in the mitochondrial (mtDNA) and in the nuclear DNA (nDNA) to reprogram them into neural progenitor cells and into dopaminergic neurons. The researchers are using this experimental system to screen FDA (Food and Drug Administration, USA) and EMA (European Medicines Agency) approved drugs for a positive effect on Leigh patient-derived neuronal cells (drug repurposing) using various biochemical, optic, and morphological outcome measures. Confirmed positive hits may be used for compassionate off-label use in Leigh patients when no standard treatment is available.

Read the detailed description

Leigh syndrome is a rare severe hereditary neurological disease that typically manifests during early childhood and is characterized by the progressive loss of motor and intellectual skills. A hallmark of the disease is the degeneration of neuronal cells in the brainstem and in the basal ganglia, particularly the dopaminergic neurons therein. The genetic underpinnings of this condition are multifaceted, encompassing mutations in both nuclear genes and in those contained within the mitochondrial DNA (mtDNA). The investigators hypothesize that these mutations share a common principle in their capacity to induce dysfunction of mitochondrial processes and of bioenergetic metabolism. The precise mechanism underlying neuronal death remains to be elucidated as researchers presently lack suitable disease models. Notably, the generation of a mouse model for mtDNA mutations has not been achieved, necessitating the exclusive reliance on patient derived material for research into the pathogenesis of these diseases. Moreover, there are currently no pathogenesis-based treatment approaches that have been demonstrated to improve patients' symptoms. Here, the investigators aim to utilize reprogramming technologies to engineer innovative human-derived disease models for research into Leigh syndrome. To this end, the investigators plan generating induced pluripotent stem cells (iPSCs) from fibroblasts of different Leigh syndrome patients who carry both nuclear (e.g. in SURF1) and mtDNA mutations (e.g. in MT-ATP6). Pluripotent progenitor cells offer a novel approach to better understand the pathogenesis of genetic diseases. In the case of Leigh syndrome, accessible cells, such as skin or blood cells, are almost never clinically affected. However, the nerve cells of the basal ganglia, which cannot be obtained via biopsies, are predominantly affected. The underlying mechanisms by which these dopaminergic neurons are particularly vulnerable to mitochondrial dysfunction and subsequent death remain to be elucidated. The objective of this study is to differentiate these induced pluripotent stem cells (iPSCs) into neural precursor cells (NPCs) and then into a neuronal cell population that is predominant inside the basal ganglia, such as dopaminergic neurons. Subsequently, a detailed analysis of these neurons will be conducted to ascertain mitochondrial and metabolic parameters, with the objective of elucidating neuronal changes associated with mitochondrial disease. Consequently, based on the identified dysfunction, imaging test procedures will be developed that are aimed at high sample throughput. This should enable high-throughput screening of molecule libraries on patient-specific iPSC-based neuronal cells for drug repurposing. The initial phase of the study has identified four potential metrics to be used for the screening of EMA and FDA approved drugs (repurposing): [1] measurement of the mitochondrial membrane potential using fluorophores, [2] measurement of calcium transients using fluorophores and reporter constructs, [3] measurement of the oxygen consumption rate (OCR) and the extracellular acidification rate (ECAR) using a Seahorse flux analyzer, and [4] investigation of the axonal outgrowth and branching patterns of the iPSC-derived neuronal cells by high-content screening. Compounds for which the investigators are able to confirm a positive effect by the above mentioned read-out methods will subsequently be provided to a selected number of patients for off-label compassionate use in cases where no standard treatment is available.

Being tested
skin biopsy, generation of iPSCs, blood drawing, off-label compassionate drug use
Keywords
mitochondrial disease, drug repurposing, Leigh syndrome, iPSC derived neural cells, off-label compassionate use, dopaminergic neurons, neuronal precursor cells, maternal inheritance, autosomal recessive inheritance, autosomal dominant inheritance, X-chromosomal recessive inheritance
Medical subject headings
Leigh Disease, Mitochondrial Diseases, Multiple Pterygium Syndrome, Autosomal Dominant

What participants receive

What participants receive. In a randomised study each person is assigned to one group by chance.

  • skin biopsyProcedure or surgery

    Taking a punch skin biopsy of 3 mm diameter under local anesthesia and culturing skin fibroblasts from them.

  • generation of iPSCsOther

    Using cultured skin fibroblasts of the patients, iPSCs will be generated according to standard procedures.

  • blood drawingDiagnostic test

    Drawing blood from a peripheral vein for DNA and RNA isolation. The degree of heteroplasmy (mutation load) for the mtDNA mutation will be determined in the blood DNA.

  • off-label compassionate drug useDrug

    In case the investigators identify a positive hit during drug repurposing with FDA and EMA approved substances, they will offer it as off-label compassionate use to patients for whom no standard treatment is available.

Study groups in NCT06967831
Study groupRoleWhat they receive
Leigh Syndrome (Maternally Inherited, MILS)Patients with Leigh syndrome carrying disease-causing mutations in their mtDNA. This subtype of Leigh syndrome is called Maternally Inherited Leigh Syndrome (MILS)
Receives: Procedure: skin biopsy; Other: generation of iPSCs; Diagnostic Test: blood drawing; Drug: off-label compassionate drug use
Leigh Syndrome (AR, AD, XR)Patients with mitochondrial diseases that are caused by mutations in the nuclear DNA, which may be inherited in an autosomal recessive (AR), autosomal dominant (AD), or X-chromosomal recessive (XR) mode of inheritance.
Receives: Procedure: skin biopsy; Other: generation of iPSCs; Diagnostic Test: blood drawing; Drug: off-label compassionate drug use

What is being measured

The primary outcome is the main question the study is designed to answer.

  1. Reduction of the increased mitochondrial membrane potential

    The investigators will measure the mitochondrial membrane potential in Leigh patient iPSC-derived neural cells. If the membrane potential can be normalized, a drug will be considered a positive hit. The membrane potential will be determined indirectly by the fluorescence intensity measurement of a membrane potential sensitive dye (TMRM). The patients' fluorescence readings will be compared to the fluorescence readings of neural cells that have been generated from healthy control iPSCs.

    Measured: 1 year

Secondary outcomes (2)
  1. Reconstitution of the neural outgrowth pattern

    The invesitgators will measure the neural axonal outgrowth and branching pattern in Leigh patient iPSC-derived neural cells using high content screening. If a normal outgrowth and branching pattern can be reconstituted in the patient iPSC-derived neural cells, a drug will be considered a positive hit. Axonal outgrowth and branching will be determined by high throughput parallel microscopy. This will determine the axonal growth velocity and the number of branch points per axon. Patients' data will be compared to healthy control iPSC-derived neural cells.

    Measured: 1 year

  2. Measuring calcium transients in iPSC derived neural cells

    The investigators will measure calcium transients in Leigh patient iPSC-derived neural cells after electrical stimuation or after chmical stimulation using histamin. This essay will be used for high content screening. If a normal calcium signalling pattern can be reconstituted, a drug will be considered a positive hit. The mitochondrial calcium content will be determined using a fluorescent reporter construct (CEPIA) that is targeted into the mitochondrial matrix. No calibrated absolute measurements are possible. The calcium transients of the patient iPSC-derived neural cells will be compared to those of healthy control iPSC-derived neural cells.

    Measured: 1 year

Timeline

From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.

  1. First posted13 May 2025
  2. Study start1 Mar 2020
  3. Primary completion28 Feb 2030 (estimated)
  4. Study completion28 Feb 2030 (estimated)

Resources

More details

For doctors and researchers: how the study is designed, who runs it, and its registry IDs.

Study design
Study type
Observational
Observational model
Case only
Time perspective
Prospective
Enrolment
80 participants (estimated)
IDs, dates and publications
ClinicalTrials.gov ID
NCT06967831
Sponsor's protocol ID
EA2_131_13
Acronym
cureMILS
Status last verified
May 2025
First submitted
20 Apr 2025
Last updated
13 May 2025
Results posted
No
Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No
Individual data sharing
Undecided: Data can be shared upon reasonable request. A data accession committee will decide on each request.

Publications

  • Lorenz C, Lesimple P, Bukowiecki R, Zink A, Inak G, Mlody B, Singh M, Semtner M, Mah N, Aure K, Leong M, Zabiegalov O, Lyras EM, Pfiffer V, Fauler B, Eichhorst J, Wiesner B, Huebner N, Priller J, Mielke T, Meierhofer D, Izsvak Z, Meier JC, Bouillaud F, Adjaye J, Schuelke M, Wanker EE, Lombes A, Prigione A. Human iPSC-Derived Neural Progenitors Are an Effective Drug Discovery Model for Neurological mtDNA Disorders. Cell Stem Cell. 2017 May 4;20(5):659-674.e9. doi: 10.1016/j.stem.2016.12.013. Epub 2017 Jan 26.

    PubMed 28132834
  • Diodato D, Schiff M, Cohen BH, Bertini E, Rahman S; Workshop participants. 258th ENMC international workshop Leigh syndrome spectrum: genetic causes, natural history and preparing for clinical trials 25-27 March 2022, Hoofddorp, Amsterdam, The Netherlands. Neuromuscul Disord. 2023 Aug;33(8):700-709. doi: 10.1016/j.nmd.2023.06.002. Epub 2023 Jun 15. No abstract available.

    PubMed 37541860
  • Henke MT, Zink A, Diecke S, Prigione A, Schuelke M. Generation of two mother-child pairs of iPSCs from maternally inherited Leigh syndrome patients with m.8993 T > G and m.9176 T > G MT-ATP6 mutations. Stem Cell Res. 2023 Mar;67:103030. doi: 10.1016/j.scr.2023.103030. Epub 2023 Jan 17.

    PubMed 36669241
  • Steiner T, Zink A, Henke MT, Cecchetto G, Buenning M, Rossi A, Schuelke M, Prigione A. RNA-based generation of iPSCs from a boy carrying the mutation m.9185 T>C in the mitochondrial gene MT-ATP6 and from his healthy mother. Stem Cell Res. 2022 Oct;64:102920. doi: 10.1016/j.scr.2022.102920. Epub 2022 Sep 15.

    PubMed 36137325
  • Carli S, Levarlet A, Diodato D, Bertini ES, Martinelli D, Malandrini A, Lopergolo D, Gallus GN, Ganetzky RD, La Morgia C, Carelli V, Primiano G, Dominguez-Gonzalez C, Serrano-Lorenzo P, Martin MA, Ardissone A, Lamperti C, Nicoletta V, Klopstock T, Distelmaier F, Zeng L, Buchner B, Mancuso M, Schuelke M, Prigione A, Garone C. Natural History of Patients With Mitochondrial ATPase Deficiency Due to Pathogenic Variants of MT-ATP6 and MT-ATP8. Neurology. 2025 Apr;104(7):e213462. doi: 10.1212/WNL.0000000000213462. Epub 2025 Mar 20.

    PubMed 40112238
  • Inak G, Rybak-Wolf A, Lisowski P, Pentimalli TM, Juttner R, Glazar P, Uppal K, Bottani E, Brunetti D, Secker C, Zink A, Meierhofer D, Henke MT, Dey M, Ciptasari U, Mlody B, Hahn T, Berruezo-Llacuna M, Karaiskos N, Di Virgilio M, Mayr JA, Wortmann SB, Priller J, Gotthardt M, Jones DP, Mayatepek E, Stenzel W, Diecke S, Kuhn R, Wanker EE, Rajewsky N, Schuelke M, Prigione A. Defective metabolic programming impairs early neuronal morphogenesis in neural cultures and an organoid model of Leigh syndrome. Nat Commun. 2021 Mar 26;12(1):1929. doi: 10.1038/s41467-021-22117-z.

    PubMed 33771987

Questions about this trial

What is this clinical trial studying?

An observational study of Leigh Syndrome (Maternally Inherited, MILS) and Leigh Syndrome (AR, AD, XR), run by Charite University, Berlin, Germany at 2 sites in Germany.

The full registered description is in the About this study section and the official record.

Is this clinical trial currently recruiting?

The record says: looking for participants now, as of the sponsor's last update on 13 May 2025. Status can change between updates, so confirm with the study contact before making plans.

Where is the study taking place?

The record lists 2 sites in Germany. Whether a site is taking part right now should be confirmed with that site. See every site.

What are the possible benefits and risks?

They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.

Are results available for this study?

This study is still under way. Results are not available in the source record yet.

How can a doctor refer a patient or contact the research team?

Contact Markus Schuelke, MD (+49 30 4505 66112, markus.schuelke@charite.de), or a site near the patient. AzTrials does not enrol participants or take referrals.

What does the primary outcome measure?

Reduction of the increased mitochondrial membrane potential (time frame: 1 year). It is what the study was designed to measure, not a finding.

Where can I read the original study information?

On the ClinicalTrials.gov record for NCT06967831, which also lists 6 linked publications.

Does a listing mean the treatment is approved or proven to work?

No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.

How often is this information updated?

AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 13 May 2025.

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