Metabolic Profiling of Saliva in Pregnancy and Periodontal Disease

The main objective of this study is to investigate the impact of physiological hormonal changes during pregnancy on periodontal status and to determine the metabolic pathways through which this effect occurs. For this purpose, saliva samples collected at different stages of pregnancy (1st, 2nd, and 3rd trimesters), in the postpartum period, and from systemically healthy non-pregnant individuals will be analyzed using an untargeted metabolomic approach based on LC-MS/MS. The analysis aims to identify potential metabolites and biochemical pathways that reflect the relationship between pregnancy-associated hormonal changes and periodontal tissues, thereby contributing to a better understanding of the underlying biological mechanisms.

This study will include 15 volunteer pregnant women aged 18-40, who are systemically healthy and whose pregnancy is progressing without complications, followed by a single gynecologist at the Department of Obstetrics and Gynecology, Bezmialem Vakıf University. The diagnosis of pregnancy will be confirmed by the detection of positive serum beta-hCG (human chorionic gonadotropin) levels and ultrasound confirmation of intrauterine gestation. Trimesters will be clearly classified according to gestational week determined by ultrasound. The included participants will be followed in the 1st (weeks 0-13), 2nd (weeks 14-27), and 3rd trimesters (week 28 and later), as well as at 6-8 weeks postpartum.

The control group will consist of 15 systemically healthy volunteers aged 18-40, who apply to the Department of Periodontology at Bezmialem Vakıf University. These participants will have a regular menstrual cycle, no hormonal disorders or systemic diseases, and no pregnancy within the last six months. Informed consent will be obtained from all participants before enrollment. Medical and dental histories will be recorded at the beginning of the study.

To evaluate periodontal status, plaque index (PI), bleeding on probing (BOP), probing depth (PD in mm), and clinical attachment level (CAL) will be measured at each visit (1st, 2nd, and 3rd trimesters and postpartum period for pregnant women, and early follicular phase of spontaneous or progesterone-induced menstrual cycle for controls). All measurements will be performed by a single calibrated periodontist at the Department of Periodontology, Bezmialem Vakıf University. Periodontal parameters will be recorded at six sites per tooth (mesiobuccal, buccal, distobuccal, mesiolingual, lingual, and distolingual) using a Williams periodontal probe (Hu-Friedy, Chicago, IL). Third molars will be excluded.

Participants with no clinical attachment loss, probing depth ≤3 mm, and bleeding on probing <10% will be classified as periodontally healthy. Those with no clinical attachment loss, probing depth ≤3 mm, and BOP >30% will be considered as having gingivitis. Participants with interproximal clinical attachment loss on at least two non-adjacent teeth and probing depth ≥4 mm will be diagnosed with periodontitis. Oral hygiene instructions will include the use of mechanical aids only (toothbrush, dental floss, interdental brush), and participants will be instructed to avoid using mouthwash or antimicrobial agents.

Before clinical periodontal measurements, saliva samples will be collected by another periodontist. Participants will be instructed not to eat or drink anything (except water) and not to chew gum before sampling, following an overnight fast. Unstimulated saliva will be collected by asking the participant to pool saliva in the mouth for approximately 5 minutes and then gently spit approximately 2.0 mL of saliva into a sterile glass beaker. The samples will then be transferred to sterile Eppendorf tubes using a micropipette, labeled, and stored at -80°C until analysis.

Before analysis, all saliva samples will be centrifuged at +4°C, 10,000 g for 10 minutes by a single researcher at the Department of Medical Biochemistry, Bezmialem Vakıf University, to remove particulate matter. The samples will then be prepared for LC-MS/MS analysis. In the LC-MS/MS system, each sample will first be separated into components by liquid chromatography (LC) and then identified based on their molecular masses using mass spectrometry (MS).

The data obtained from mass spectrometry will be analyzed using metabolite identification software and international metabolite databases (HMDB, KEGG, METLIN, etc.). The resulting metabolomic profiles will be used to explore biological pathways associated with pregnancy and periodontal status.