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Hashimoto ThyroiditisTHYRODNANCT02491567

DNA Methylation and Autoimmune Thyroid Diseases

An observational study of Hashimoto Thyroiditis and Graves Disease, run by Aristotle University Of Thessaloniki at 1 site in Greece.

Completed

Finished. The study has ended and is not enrolling. Results may be posted on the official record.

Official record
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Trial summary

Hashimoto Thyroiditis (HT) and Graves Disease (GD) are known to be caused by abnormal immune response against self cells and tissues. Epigenetics is a novel field of biology studying the mechanisms by which the environment interacts with the genotype to produce a variety of phenotypes through modifications to… Read more about this study

Who is it for?
Ages 4 to 18 yearsHealthy volunteers can take part
Conditions the study is for
Hashimoto Thyroiditis, Graves Disease
How many people
110 participants
Where
1 siteGreece
Study dates
Sep 2014to Apr 2018
Phase
Observational
Are there results?
None posted in the registry

Key requirements

Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.

  • Ages 4 to 18 years
  • All sexes
  • Healthy volunteers accepted
  • Child, Adult

Study population: Children and adolescents of Greek origin, aged 4-18 years old with a diagnosis of Hashimoto Thyroiditis and Graves Disease as well as healthy controls.

Who may be able to join

  • For HT:
  • A positive titers of antithyroid peroxidase (anti-TPO) or antithyroglobulin (anti-Tg) antibodies and at least one of:
  • Abnormal thyroid function that requires substitution treatment with L-thyroxine (TSH > 5 μIU/ml and decreased or normal levels of fT4 or fT3)
  • Increased volume of thyroid gland (goiter)
  • Morphological changes on ultrasound of the thyroid gland
  • For GD:
Show all 12Show fewer
  • A positive titers of thyroid stimulating antibodies (anti-TSI) and
  • Decreased TSH levels and increased levels of fT4 or fT3
  • For Controls:
  • Otherwise healthy children and adolescents, age- and gender-matched with patients
  • Absence of previously known chronic disease of autoimmune aetiology or atopy (including those with a history of chronic treatment with antihistamines, anti-inflammatory, corticosteroids or anti-epileptic drugs)
  • Absence of a family history of autoimmune disease in first-degree relatives

Who cannot join

  • Not Caucasian origin or affinity among participants
  • Age of diagnosis above 18 years
  • Disease duration below 3 months

Trial locations and contacts

1 site in 1 country.

Greece1 site
  • Unit of Pediatric Endocrinology, Diabetes and Metabolism-4th Department of Pediatrics, Medical School of Aristotle University of Thessaloniki

    Thessaloniki, 56403

Other trials in Greece

About this study

Official title: Study of DNA Methylation in Children and Adolescents With Autoimmune Thyroid Diseases

Hashimoto Thyroiditis (HT) and Graves Disease (GD) are known to be caused by abnormal immune response against self cells and tissues. Epigenetics is a novel field of biology studying the mechanisms by which the environment interacts with the genotype to produce a variety of phenotypes through modifications to chromatin that do not directly alter the DNA sequence. A very limited number of epigenetic studies have been published in patients with HT and GD so far. Therefore, the purpose of this study is to analyze DNA methylation status in White Blood Cells (WBCs) within the promoter regions of genomic sites that have been previously identified as susceptibility loci or sites for autoimmune thyroid disease, such as the CD40L, FOXP3, CTLA4, PTPN22, IL2RA, FCRL3 and HLADRB1 genes.

Read the detailed description

Hashimoto Thyroiditis (HT) and Graves Disease (GD) are known to be caused by abnormal immune response against self cells and tissues. HT involves a cell-mediated autoimmune destruction of the thyroid leading to hypothyroidism. GD is caused by a process in which immune cells make stimulating antibodies against the thyroid stimulating hormone (TSH) receptor on the thyroid gland, thus leading to hyperthyroidism. Although there is substantial evidence that genetic factors increase the risk for developing autoimmune diseases, monozygotic twins still remain discordant for disease (disease concordance is never 100%), thus suggesting a role for environmental factors and epigenetics.

Epigenetics is a novel field of biology studying the mechanisms by which the environment interacts with the genotype to produce a variety of phenotypes through modifications to chromatin that do not directly alter the DNA sequence. These modifications have been associated with altered gene expression and silencing of repetitive elements and can be inherited mitotically. Epigenetic mechanisms include DNA methylation, histone modifications, or miRNA post-transcriptional regulation. DNA methylation involves the covalent addition of a methyl group to the carbon-5 position in the CpG dinucleotide from the methyl donor S-adenosylmethionine and is mediated by a group of enzymes called DNA methyltransferases (DNMTs). CpG dinucleotides are typically grouped together in regions known as CGIs (islands). CGIs can be found in the promoter regions of genes, and CpG methylation of these gene promoters is associated with transcriptional silencing. In contrast, hypermethylated genes have been found to be transcriptionally active.

A very limited number of epigenetic studies have been published in patients with HT and GD so far. Therefore, the purpose of this study is to analyze DNA methylation status in White Blood Cells (WBCs) within the promoter regions of genomic sites that have been previously identified as susceptibility loci or sites for autoimmune thyroid disease, such as the CD40L, FOXP3, CTLA4, PTPN22, IL2RA, FCRL3 and HLADRB1 genes.

Initially, recruitment of patients and controls as well as blood sample collection will be done. A complete physical examination will also be performed in all participants included in the study, and a detailed personal, family, gestational and perinatal history will be obtained as well before inclusion. Blood samples by all participants will be collected and centrifuged and then White Blood Cells (WBCs), plasma and serum will be separated and stored in a deep freezer.

Laboratory analyses will follow. DNA will be isolated from peripheral leukocytes using the QIAamp DNA Blood Mini Kit, according to the manufacturer's instructions. It will then be treated with sodium bisulfite using the Zymo EZ DNA Methylation-Gold Kit, again according to the manufacturer's protocol. Therefore, unmethylated cytosines will be converted into uracyls, whereas methylated cytosines will remain unchanged. Quantification of the methylation status of DNA at the gene promoter regions under study will be made, using specific primers that detect modified DNA, by real-time PCR and analysis of the melting curves of the selected fragments of DNA. Amplicons will also be analyzed by electrophoresis and visualized by ultraviolet trans-illumination.

An electronic Data Base will be constructed and Statistical Analysis will follow. Results and Conclusions will be published in peer-review journals and presented in International Meetings.

Medical subject headings
Hashimoto Disease, Graves Disease

What participants receive

What participants receive. In a randomised study each person is assigned to one group by chance.

Study groups in NCT02491567
Study groupRoleWhat they receive
Hashimoto Thyroiditis (HT)Children and adolescents with Hashimoto thyroiditis either hypothyroidic or euthyroidic.
Graves Disease (GD)Children and adolescents with Graves Disease both those on remission and under antihyroid medication.
Controls (C)Healthy individuals matched for gender and age without 1) any autoimmune disease 2) family history of autoimmune disease in the first degree relatives

What is being measured

The primary outcome is the main question the study is designed to answer.

  1. DNA methylation status of CpGs within gene promoters

    Percentage of DNA methylation of CpGs within the CD40L, FOXP3, CTLA4, PTPN22, IL2RA, FCRL3 and HLADRB1 promoter genes in White Blood Cells (WBCs).

    Measured: 1 month

Secondary outcomes (33)
  1. Age

    Age of each participant

    Measured: 1 day

  2. Age of disease onset

    Age of disease diagnosis

    Measured: 1 day

  3. Sex

    Male or female

    Measured: 1 day

  4. Body mass index

    Weight in kg / height in m * height in m

    Measured: 1 day

  5. Pubertal stage

    Prepubertal or pubertal stage

    Measured: 1 day

  6. Antibodies titre

    Titre of antiTPO, antiTg, anti-TSI antibodies in blood

    Measured: 1 day

  7. Thyroid volume

    Volume of the thyroid gland in total (both lobes)

    Measured: 1 day

  8. Treatment dose

    Dose of Levothyroxine/thiamazole per kg of body weight /per day (if applicable)

    Measured: 1 day

  9. B12

    Levels of B12 in blood

    Measured: 1 day

  10. Folic acid

    Levels of folic acid in blood

    Measured: 1 day

  11. IgA, IgG, IgM, IgE immunoglobulins

    Levels of IgA, IgG, IgM, IgE immunoglobulins in blood

    Measured: 1 day

  12. History of infections

    Number of previous febrile viral /bacterial infections per year

    Measured: 1 day

  13. History of medications

    Number of previous medications per year

    Measured: 1 day

  14. Other autoimmune diseases

    Diagnosis of co-existing autoimmune disease (except autoimmune thyroid disease)

    Measured: 1 day

  15. Family history of autoimmune thyroid (or other) disease

    Family history of autoimmune thyroid (or other) disease or not

    Measured: 1 day

  16. Parental educational level

    Elementary school, high school or university graduate

    Measured: 1 day

  17. Type of Residence

    Urban or rural residence

    Measured: 1 day

  18. Parental smoking

    Total number of cigarettes per day during their child's life separately for each parent (if applicable)

    Measured: 1 day

  19. Previous births

    Number of previous births

    Measured: 1 day

  20. Month of birth

    Month of birth (from January to December)

    Measured: 1 day

  21. Delivery type

    Cesarean section or vaginal delivery

    Measured: 1 day

  22. Birth weight

    Birth weight

    Measured: 1 day

  23. Gestation duration

    Duration of pregnancy

    Measured: 1 day

  24. Medications during pregnancy

    Number of medications of any type received during pregnancy (if applicable)

    Measured: 1 day

  25. Maternal smoking during pregnancy

    Total number of cigarettes per day during pregnancy (if applicable)

    Measured: 1 day

  26. Maternal alcohol consumption during pregnancy

    Total number of glasses of alcohol consumption per day during pregnancy (if applicable)

    Measured: 1 day

  27. Pre-eclampsia (during pregnancy)

    Diagnosis of pre-eclampsia (during pregnancy) or not

    Measured: 1 day

  28. Gestational diabetes (during pregnancy)

    Diagnosis of gestational diabetes (during pregnancy) or not

    Measured: 1 day

  29. Vaginal bleeding (during pregnancy)

    Presence of vaginal bleeding (during pregnancy) or not

    Measured: 1 day

  30. Maternal febrile infection (during pregnancy)

    Diagnosis of maternal febrile infection (during pregnancy) or not

    Measured: 1 day

  31. Duration of breastfeeding

    Duration of breastfeeding until discontinuance

    Measured: 1 day

  32. History of phototherapy

    History of phototherapy during neonatal period (or not)

    Measured: 1 day

  33. APGAR score

    APGAR score at 1st and 5th min of life

    Measured: 1 day

Timeline

From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.

  1. First posted8 Jul 2015 (estimated)
  2. Study startSep 2014
  3. Primary completionSep 2016
  4. Study completionApr 2018

Resources

More details

For doctors and researchers: how the study is designed, who runs it, and its registry IDs.

Study design
Study type
Observational
Observational model
Case-control
Time perspective
Cross-sectional
Enrolment
110 participants (actual)
IDs, dates and publications
ClinicalTrials.gov ID
NCT02491567
Sponsor's protocol ID
62/17-2-2014
Acronym
THYRODNA
Status last verified
Sep 2019
First submitted
23 Dec 2014
Last updated
26 Sep 2019
Results posted
No
Data monitoring committee
No
FDA-regulated drug
No
FDA-regulated device
No

Publications

  • Akirav EM, Lebastchi J, Galvan EM, Henegariu O, Akirav M, Ablamunits V, Lizardi PM, Herold KC. Detection of beta cell death in diabetes using differentially methylated circulating DNA. Proc Natl Acad Sci U S A. 2011 Nov 22;108(47):19018-23. doi: 10.1073/pnas.1111008108. Epub 2011 Nov 9.

    PubMed 22074781
  • Barrett JC, Clayton DG, Concannon P, Akolkar B, Cooper JD, Erlich HA, Julier C, Morahan G, Nerup J, Nierras C, Plagnol V, Pociot F, Schuilenburg H, Smyth DJ, Stevens H, Todd JA, Walker NM, Rich SS; Type 1 Diabetes Genetics Consortium. Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. Nat Genet. 2009 Jun;41(6):703-7. doi: 10.1038/ng.381. Epub 2009 May 10.

    PubMed 19430480
  • Cooper JD, Simmonds MJ, Walker NM, Burren O, Brand OJ, Guo H, Wallace C, Stevens H, Coleman G; Wellcome Trust Case Control Consortium; Franklyn JA, Todd JA, Gough SC. Seven newly identified loci for autoimmune thyroid disease. Hum Mol Genet. 2012 Dec 1;21(23):5202-8. doi: 10.1093/hmg/dds357. Epub 2012 Aug 24.

    PubMed 22922229
  • Dang MN, Buzzetti R, Pozzilli P. Epigenetics in autoimmune diseases with focus on type 1 diabetes. Diabetes Metab Res Rev. 2013 Jan;29(1):8-18. doi: 10.1002/dmrr.2375.

    PubMed 23180441
  • Davies TF, Latif R, Yin X. New genetic insights from autoimmune thyroid disease. J Thyroid Res. 2012;2012:623852. doi: 10.1155/2012/623852. Epub 2012 Feb 28.

    PubMed 22530160
  • Fradin D, Le Fur S, Mille C, Naoui N, Groves C, Zelenika D, McCarthy MI, Lathrop M, Bougneres P. Association of the CpG methylation pattern of the proximal insulin gene promoter with type 1 diabetes. PLoS One. 2012;7(5):e36278. doi: 10.1371/journal.pone.0036278. Epub 2012 May 2.

    PubMed 22567146
  • Huber A, Menconi F, Corathers S, Jacobson EM, Tomer Y. Joint genetic susceptibility to type 1 diabetes and autoimmune thyroiditis: from epidemiology to mechanisms. Endocr Rev. 2008 Oct;29(6):697-725. doi: 10.1210/er.2008-0015. Epub 2008 Sep 5.

    PubMed 18776148
  • Lu Q. The critical importance of epigenetics in autoimmunity. J Autoimmun. 2013 Mar;41:1-5. doi: 10.1016/j.jaut.2013.01.010. Epub 2013 Feb 1.

    PubMed 23375849
  • MacFarlane AJ, Strom A, Scott FW. Epigenetics: deciphering how environmental factors may modify autoimmune type 1 diabetes. Mamm Genome. 2009 Sep-Oct;20(9-10):624-32. doi: 10.1007/s00335-009-9213-6. Epub 2009 Aug 22.

    PubMed 19697079
  • Quintero-Ronderos P, Montoya-Ortiz G. Epigenetics and autoimmune diseases. Autoimmune Dis. 2012;2012:593720. doi: 10.1155/2012/593720. Epub 2012 Mar 22.

    PubMed 22536485
  • Rakyan VK, Beyan H, Down TA, Hawa MI, Maslau S, Aden D, Daunay A, Busato F, Mein CA, Manfras B, Dias KR, Bell CG, Tost J, Boehm BO, Beck S, Leslie RD. Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis. PLoS Genet. 2011 Sep;7(9):e1002300. doi: 10.1371/journal.pgen.1002300. Epub 2011 Sep 29.

    PubMed 21980303
  • Weetman AP. Determinants of autoimmune thyroid disease. Nat Immunol. 2001 Sep;2(9):769-70. doi: 10.1038/ni0901-769. No abstract available.

    PubMed 11526381
  • Yin X, Latif R, Tomer Y, Davies TF. Thyroid epigenetics: X chromosome inactivation in patients with autoimmune thyroid disease. Ann N Y Acad Sci. 2007 Sep;1110:193-200. doi: 10.1196/annals.1423.021.

    PubMed 17911434

Questions about this trial

What is this clinical trial studying?

An observational study of Hashimoto Thyroiditis and Graves Disease, run by Aristotle University Of Thessaloniki at 1 site in Greece.

The full registered description is in the About this study section and the official record.

Who may be eligible to take part?

The sponsor lists 12 inclusion and 3 exclusion criteria. Eligibility is decided by the study team after screening, so read the full criteria and contact a listed site.

Is this clinical trial currently recruiting?

The record says: finished, as of the sponsor's last update on 26 Sep 2019. Status can change between updates, so confirm with the study contact before making plans.

Where is the study taking place?

The record lists 1 site in Greece. Whether a site is taking part right now should be confirmed with that site. See every site.

What are the possible benefits and risks?

They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.

Are results available for this study?

The study is completed, but results are not available in the source record. That does not mean the treatment did or did not work.

How can a doctor refer a patient or contact the research team?

The record lists no contact. The official record names the sponsor, who can be asked directly. AzTrials does not enrol participants or take referrals.

What does the primary outcome measure?

DNA methylation status of CpGs within gene promoters (time frame: 1 month). It is what the study was designed to measure, not a finding.

Where can I read the original study information?

On the ClinicalTrials.gov record for NCT02491567, which also lists 13 linked publications.

Does a listing mean the treatment is approved or proven to work?

No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.

How often is this information updated?

AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 26 Sep 2019.

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