Bordetella Pertussis, Whooping CoughPERT-SEVEREIINCT05897879
Impact of Bacterial Expression and Immune Response in the Severity of Pertussis
A study testing Nasopharyngeal swab and Blood samples in people with Bordetella Pertussis, Whooping Cough, run by Institut Pasteur at 14 sites in France.
Trial summary
The resurgence of pertussis is associated with an evolutionary mechanism under the pressure of current acellular vaccines, with a possible impact on vaccine effectiveness and disease expression. Read more about this study
- Who is it for?
- Ages Up to 15 years
- Conditions the study is for
- Bordetella Pertussis, Whooping Cough
- What is being tested?
- Nasopharyngeal swab and Blood samples
- Could I receive a placebo?
- No, everyone receives an active treatment
- How many people
- 210 participants
- Where
- 14 sitesFrance
- Study dates
- 16 Nov 2023to 16 Nov 2026
- Phase
- Interventional
- Are there results?
- Not yet: the study is under way
Key requirements
Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.
- Ages Up to 15 years
- All sexes
- No healthy volunteers
- Child
Who may be able to join
- be between the ages of 0 and 15 years inclusive
- be suspected of having pertussis by the physician in charge, with the prescription of a diagnostic PCR (pertussis PCR, which may be a syndromic PCR, a PCR targeting IS481 and/or IS1001)
- be free of any pathology/treatment that may influence the immune response (autoimmune/inflammatory pathology or immune deficiency not listed above, hepatic insufficiency, taking immunosuppressive treatment (including taking oral corticosteroids with a dose ≥ 10 mg/d Prednisone equivalent for more than 15 days)
- Have received age-appropriate information and written assent or consent from their parents/legal guardians
- be affiliated with or benefiting from a social security plan
Who cannot join
- Patient with any pathology/treatment that may influence the immune response (autoimmune/inflammatory pathology or immune deficiency not listed above, hepatic failure, taking immunosuppressive therapy (including oral corticosteroids with dose ≥ 10 mg/d prednisone equivalent for more than 15 days)
- Use of antibiotics active against pertussis in the 24 hours preceding the sampling
- Delay between the result of the diagnostic sample (pertussis PCR) and the day of inclusion > 48 hours
- Patient's condition that, in the opinion of the physician, is incompatible with the expanded/additional sampling(s) required by the study
- Infant with a weight < 2.5 kg at the time of inclusion.
Trial locations and contacts
14 sites in 1 country. Contact the study team or a site near you to ask about taking part.
14 sites in 1 country
France14 sites, 14 recruiting
- Not yet recruiting
CHU de Bordeaux
Bordeaux
Emilie Pauquet, MD
- Recruiting
Hôpital Louis Mourier
Colombes
Romain Basmaci, MD
- Not yet recruiting
Centre hospitalier intercommunal de Créteil
Créteil
Fouad Madhi, MD
- Recruiting
Hôpital Roger Salengo
Lille
François Dubos, MD
- Recruiting
Hospices Civils de Lyon
Lyon
Antoine Ouziel, MD
- Recruiting
Hôpital de la Timone Enfants, APHM
Marseille
Aurélie Morand, MD
- Recruiting
Hôpital Nord, APHM
Marseille
Philippe Minodier, MD
- Not yet recruiting
CHU de Nantes
Nantes
David Malorey, MD
- Recruiting
CHU Armand Trousseau
Paris
Mathie Lorrot, MD
- Recruiting
Hopital Necker
Paris
Julie Toubiana, MD
- Not yet recruiting
Hôpital Robert Debré
Paris
Albert Faye, MD
- Not yet recruiting
CHU Rouen
Rouen
Didier Pinquier, MD
- Not yet recruiting
Réseau ACTIV
Saint-Maur-des-Fossés
Robert Cohen, MD
- Recruiting
CHU de Toulouse
Toulouse
Camille Brehin, MD
About this study
The resurgence of pertussis is associated with an evolutionary mechanism under the pressure of current acellular vaccines, with a possible impact on vaccine effectiveness and disease expression. Little is known about the mechanisms involved in the clinical variability of pertussis, including its most severe malignant form observed in infants (mortality between 50-80%). The main challenges are: (i) the lack of knowledge about the gene expression of B. pertussis strains currently circulating during human infection, incorporating evolutionary changes and vaccine-induced selective pressure; (ii) the poor understanding of the variability in clinical expression of pertussis, and (iii) the lack of biomarkers to predict disease severity or prognosis in infants.
An integrative strategy combining a clinical, microbiological, immunological and 'omic' approach from a prospective cohort of children with pertussis will be used to identify
Read more
- 'in situ' expression profiles of B. pertussis genes and proteins incorporating recent evolutionary changes and
- a systemic and respiratory immune signature in B. pertussis-infected children according to severity.
Results should furthermore serve as a prerequisite for the identification of severity biomarkers and new vaccine antigen candidates taking into account specific immune responses in infants.
Read the detailed description
The study design is characterized by 4 work packages:
- Collection of clinical data and biological samples (deep nasal swab, blood sample) from children with pertussis
- Construction and validation of a microbial panel of 200 genes of interest (involved in virulence and/or potential vaccine antigens) for transcriptomic analysis
- Transcriptomic study using the panel of interest of B. pertussis isolates from nasopharyngeal swabs preserved with an RNA stabilizer, using the Nanostring® technique
- Study of the immune response during pertussis
- Conditions
- Bordetella Pertussis, Whooping Cough
- Being tested
- Nasopharyngeal swab, Blood samples
- Keywords
- vaccination
- Medical subject headings
- Whooping Cough
What participants receive
What participants receive. In a randomised study each person is assigned to one group by chance.
Nasopharyngeal swabBiological
For hospitalized patients :
Nasopharyngeal swab (1 aspiration or 2 swabs (1 in each nostril))
For ambulatory patients :
Deep nasal swab: 2 swabs (1 in each nostril), or 1 swab only for children for whom taking 2 swabs is complicated.
Blood samplesBiological
For hospitalized patients : 3 to 7.5 ml For ambulatory patients: Fingertip blood sampling
| Study group | Role | What they receive |
|---|---|---|
| Children between 0 and 15 years with suspected pertussis | Other | Not described Receives: Biological: Nasopharyngeal swab; Biological: Blood samples |
What is being measured
The primary outcome is the main question the study is designed to answer.
Measurement of expression level of Bp genes during infection by Nanostring transcriptomic analysis of Bp isolates from the nasopharynx of children with pertussis.
To identify in a standardized way the microbial "in situ" expression profiles of currently circulating Bp genes during infection in children ;
Measured: 3 years
Measurement of plasma cytokine and chemokine concentrations by SIMOA digital ELISA
To determine systemic and respiratory immune responses in children during pertussis.
Measured: 3 years
Phenotyping of immune cells by cytometry with a 20-color flow cytometry panel
To determine systemic and respiratory immune responses in children during pertussis.
Measured: 3 years
Secondary outcomes (3)
Measurement of expression level of Bp genes which is modified by recent gene developments related to vaccine pressure by Nanostring transcriptomic analysis of Bp isolates
List of microbial genes which expression is modified by recent genomic developments related to vaccine pressure
Measured: 3 years
Measurement of high expression level of Bp genes in all clinical forms of pertussis by Nanostring transcriptomic analysis of Bp isolates
To identify new candidate Bp genes for a future protein vaccine
Measured: 3 years
Measurement of expression level of Bp genes which is associated with severe pertussis by Nanostring transcriptomic analysis of Bp isolates
List of virulence genes differentially expressed during severe pertussis
Measured: 3 years
Timeline
From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.
- First posted9 Jun 2023
- Study start16 Nov 2023
- Primary completion16 Nov 2025 (estimated)
- Study completion16 Nov 2026 (estimated)
Resources
- Official record on ClinicalTrials.govThe registry entry this page is built from, with its full change history.
- Other trials for Bordetella Pertussis, Whooping CoughStudies of the same condition, open and under way.
- More trials run by Institut PasteurThe sponsor's other registered studies.
- What the trial phases meanHow a treatment moves from first tests in people to approval.
More details
For doctors and researchers: how the study is designed, who runs it, and its registry IDs.
Study design
- Study type
- Interventional
- Phase
- Phase N/A
- Primary purpose
- Basic science
- Allocation
- Not applicable
- Intervention model
- Single group
- Masking
- None (open label)
- Enrolment
- 210 participants (estimated)
Sponsor and investigators
- Lead sponsor
- Institut Pasteur
- Sponsor type
- Industry (pharma, biotech, devices)
- Collaborators
- Hôpital Necker-Enfants Malades, Hospices Civils de Lyon, Hopital Universitaire Robert-Debre, Centre Hospitalier Intercommunal Creteil, Nantes University Hospital, Réseau ACTIV, Hôpital Armand Trousseau, CHR - Hôpital Roger Salengo, Hôpital Nord - APHM, Hôpital Louis Mourier, University Hospital, Toulouse, University Hospital, Bordeaux, Hôpital de la Timone, University Hospital, Rouen
- Responsible party
- Sponsor
- Investigators
- Julie Toubiana, MD, Study director, Institut Pasteur
IDs, dates and publications
- ClinicalTrials.gov ID
- NCT05897879
- Sponsor's protocol ID
- 2022-093
- Other IDs
- 2023-A00004-41
- Acronym
- PERT-SEVEREII
- Status last verified
- May 2024
- First submitted
- 22 May 2023
- Last updated
- 24 May 2024
- Results posted
- No
- Data monitoring committee
- No
- FDA-regulated drug
- No
- FDA-regulated device
- No
Study at a glance
From the registry record, last updated by the sponsor on 24 May 2024. Recruitment status is as the sponsor reported it: confirm with the study team.
- Official title
- Impact of Bacterial Expression and Immune Response in the Severity of Pertussis
- ClinicalTrials.gov ID
- NCT05897879
- Acronym / sponsor ID
- PERT-SEVEREII / 2022-093
- Conditions
- Bordetella Pertussis, Whooping Cough
- Keywords
- vaccination
- Study type
- Interventional
- Recruitment status
- Recruiting
- Enrolment
- 210 participants (estimated)
- Lead sponsor
- Institut PasteurIndustry (pharma, biotech, devices)
- Collaborators
- Hôpital Necker-Enfants Malades, Hospices Civils de Lyon, Hopital Universitaire Robert-Debre, Centre Hospitalier Intercommunal Creteil, Nantes University Hospital, Réseau ACTIV, Hôpital Armand Trousseau, CHR - Hôpital Roger Salengo, Hôpital Nord - APHM, Hôpital Louis Mourier, University Hospital, Toulouse, University Hospital, Bordeaux, Hôpital de la Timone, University Hospital, Rouen
- Study start
- 16 Nov 2023 (actual)
- Primary completion
- 16 Nov 2025 (estimated)
- Study completion
- 16 Nov 2026 (estimated)
- First posted
- 9 Jun 2023 (actual)
- Results
- Not posted in the source record
Clinical summary
The research question as the sponsor registered it. This describes what the study plans to test, not what it found.
The resurgence of pertussis is associated with an evolutionary mechanism under the pressure of current acellular vaccines, with a possible impact on vaccine effectiveness and disease expression. Little is known about the mechanisms involved in the clinical variability of pertussis, including its most severe malignant form observed in infants (mortality between 50-80%). The main challenges are: (i) the lack of knowledge about the gene expression of B. pertussis strains currently circulating during human infection, incorporating evolutionary changes and vaccine-induced selective pressure; (ii) the poor understanding of the variability in clinical expression of pertussis, and (iii) the lack of biomarkers to predict disease severity or prognosis in infants.
An integrative strategy combining a clinical, microbiological, immunological and 'omic' approach from a prospective cohort of children with pertussis will be used to identify
- 'in situ' expression profiles of B. pertussis genes and proteins incorporating recent evolutionary changes and
- a systemic and respiratory immune signature in B. pertussis-infected children according to severity.
Results should furthermore serve as a prerequisite for the identification of severity biomarkers and new vaccine antigen candidates taking into account specific immune responses in infants.
Detailed description
The study design is characterized by 4 work packages:
- Collection of clinical data and biological samples (deep nasal swab, blood sample) from children with pertussis
- Construction and validation of a microbial panel of 200 genes of interest (involved in virulence and/or potential vaccine antigens) for transcriptomic analysis
- Transcriptomic study using the panel of interest of B. pertussis isolates from nasopharyngeal swabs preserved with an RNA stabilizer, using the Nanostring® technique
- Study of the immune response during pertussis
Study design
- Primary purpose
- Basic science
- Allocation
- Not applicable
- Intervention model
- Single group
- Masking
- None (open label)
- Number of arms
- 1
| Arm | Type | Receives |
|---|---|---|
| Children between 0 and 15 years with suspected pertussis | Other | Biological: Nasopharyngeal swab, Biological: Blood samples |
Who may qualify
- Ages
- Up to 15 years
- Sex
- All
- Healthy volunteers
- Not accepted
- Age groups
- Child
Key inclusion criteria (5 listed)
- be between the ages of 0 and 15 years inclusive
- be suspected of having pertussis by the physician in charge, with the prescription of a diagnostic PCR (pertussis PCR, which may be a syndromic PCR, a PCR targeting IS481 and/or IS1001)
- be free of any pathology/treatment that may influence the immune response (autoimmune/inflammatory pathology or immune deficiency not listed above, hepatic insufficiency, taking immunosuppressive treatment (including taking oral corticosteroids with a dose ≥ 10 mg/d Prednisone equivalent for more than 15 days)
- Have received age-appropriate information and written assent or consent from their parents/legal guardians
- be affiliated with or benefiting from a social security plan
Key exclusion criteria (5 listed)
- Patient with any pathology/treatment that may influence the immune response (autoimmune/inflammatory pathology or immune deficiency not listed above, hepatic failure, taking immunosuppressive therapy (including oral corticosteroids with dose ≥ 10 mg/d prednisone equivalent for more than 15 days)
- Use of antibiotics active against pertussis in the 24 hours preceding the sampling
- Delay between the result of the diagnostic sample (pertussis PCR) and the day of inclusion > 48 hours
- Patient's condition that, in the opinion of the physician, is incompatible with the expanded/additional sampling(s) required by the study
- Infant with a weight < 2.5 kg at the time of inclusion.
Eligibility is decided by the study team after screening; this overview does not establish that a patient qualifies. Full inclusion and exclusion criteria.
Interventions
| Intervention | Type | Arms |
|---|---|---|
| Nasopharyngeal swabFor hospitalized patients : Nasopharyngeal swab (1 aspiration or 2 swabs (1 in each nostril)) For ambulatory patients : Deep nasal swab: 2 swabs (1 in each nostril), or 1 swab only for children for whom taking 2 swabs is complicated. | Biological | Children between 0 and 15 years with suspected pertussis |
| Blood samplesFor hospitalized patients : 3 to 7.5 ml For ambulatory patients: Fingertip blood sampling | Biological | Children between 0 and 15 years with suspected pertussis |
Primary outcome
Measurement of expression level of Bp genes during infection by Nanostring transcriptomic analysis of Bp isolates from the nasopharynx of children with pertussis.
Time frame: 3 years
To identify in a standardized way the microbial "in situ" expression profiles of currently circulating Bp genes during infection in children ;
Measurement of plasma cytokine and chemokine concentrations by SIMOA digital ELISA
Time frame: 3 years
To determine systemic and respiratory immune responses in children during pertussis.
Phenotyping of immune cells by cytometry with a 20-color flow cytometry panel
Time frame: 3 years
To determine systemic and respiratory immune responses in children during pertussis.
3 secondary outcomes
Measurement of expression level of Bp genes which is modified by recent gene developments related to vaccine pressure by Nanostring transcriptomic analysis of Bp isolates
Time frame: 3 years
Measurement of high expression level of Bp genes in all clinical forms of pertussis by Nanostring transcriptomic analysis of Bp isolates
Time frame: 3 years
Measurement of expression level of Bp genes which is associated with severe pertussis by Nanostring transcriptomic analysis of Bp isolates
Time frame: 3 years
Results and safety
This study is still under way. Results are not available in the source record yet.
Research links
- Official record on ClinicalTrials.govLast updated by the sponsor 24 May 2024.
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SARS CoV 2 Infection, RSV Infection
Referral and contact
AzTrials does not enrol participants or take referrals. Contact the study team or a site listed below; they decide who can take part.
Julie Toubiana, MD study director
Institut Pasteur
14 sites in 1 country: see every site and its status.
Questions about this trial
What is this clinical trial studying?
A study testing Nasopharyngeal swab and Blood samples in people with Bordetella Pertussis, Whooping Cough, run by Institut Pasteur at 14 sites in France.
The full registered description is in the About this study section and the official record.
Who may be eligible to take part?
The sponsor lists 5 inclusion and 5 exclusion criteria. Eligibility is decided by the study team after screening, so read the full criteria and contact a listed site.
Is this clinical trial currently recruiting?
The record says: looking for participants now, as of the sponsor's last update on 24 May 2024. Status can change between updates, so confirm with the study contact before making plans.
Where is the study taking place?
The record lists 14 sites in France. Whether a site is taking part right now should be confirmed with that site. See every site.
What are the possible benefits and risks?
They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.
Are results available for this study?
This study is still under way. Results are not available in the source record yet.
How can a doctor refer a patient or contact the research team?
Contact Julie Toubiana, MD (+331 45 68 80 05, julie.toubiana@pasteur.fr), or a site near the patient. AzTrials does not enrol participants or take referrals.
What does the primary outcome measure?
Measurement of expression level of Bp genes during infection by Nanostring transcriptomic analysis of Bp isolates from the nasopharynx of children with pertussis. (time frame: 3 years). The study lists 3 primary outcomes in all. It is what the study was designed to measure, not a finding.
Where can I read the original study information?
Does a listing mean the treatment is approved or proven to work?
No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.
How often is this information updated?
AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 24 May 2024; AzTrials last refreshed its copy on 6 Nov 2026.